Pairwise Alignments

Query, 1052 a.a., AcrB/AcrD/AcrF family protein from Agrobacterium fabrum C58

Subject, 1016 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

 Score =  555 bits (1429), Expect = e-162
 Identities = 317/1015 (31%), Positives = 555/1015 (54%), Gaps = 17/1015 (1%)

Query: 17   NLSRWAISHPSIARFLFGLIIVMGALGVINMGQKEDPDFTFRVMVVQSVWPGASIDDMQN 76
            +++R+ ++  +    L  L ++ G +  + +G+ EDP+F  R  V+ + +PGA+  ++ +
Sbjct: 2    DIARYTLAKRTSVWVLIALTLIGGYISYLKLGRFEDPEFVIRQAVIVTPYPGATAQEVSD 61

Query: 77   QVVNKIERKLQETPHLDWVKSYIRAGVAITTIQIKGD--TNGADVADAFYQVRKKVGDIK 134
            +V + IE  +Q    L  VKS    G +  T++IK +   + A +   + ++R+KV D +
Sbjct: 62   EVTDVIEGAVQALQELKEVKSVSMQGRSEVTVEIKLEFAKSSAQLQQVWDKLRRKVADAQ 121

Query: 135  QDLPSGLLGPYFNDEFGDTYITLHAISGDGYSYPELKKFAIQARDMLIAMPGVEKAVILG 194
            + LP G      ND+F D Y   +A++G+G+S  +L+ +    R  L+ +PGV KA  L 
Sbjct: 122  RQLPPGAGASIVNDDFSDVYALFYAVTGEGFSDKQLQDYVDTLRRELVLVPGVAKAATLA 181

Query: 195  DQPQKIFIDVSSKALAERGLTVVDIQNALQGQNDVDPAGSVETADRSVRISVEGDVTTPA 254
            +Q + IFI++SS+ +AE GL+V  +   LQ Q+ V  AGSV+     + +  + ++++ A
Sbjct: 182  EQQEAIFIEMSSERMAEFGLSVERVLQVLQKQSLVTVAGSVDAQQMRIPVIPKSNISSLA 241

Query: 255  EIRELRLKAGDQ--VIRLGDIATVRDGLEDPFQRKFRVNGHDTVELGVVMAKGFKVTDVG 312
            ++  L++  G    V+RLGDIA +  G  +P     R NG   +  G+    G  V ++G
Sbjct: 242  DLTNLQVAVGSNNAVVRLGDIANISRGYTEPASMLMRYNGQRAIGFGISNVTGGNVVEMG 301

Query: 313  KGIEETYKRFEDTLPVGVEVTQISNQPEVVTEAVGEFTQALMEALGIVLIVSLISIGWRS 372
              ++      E   P+G+++  IS Q + V  +V  F   L+ A+ IV +V L+ +G RS
Sbjct: 302  DAVKARLAELESQRPLGMDLHVISMQSDSVRASVANFIDNLIAAVAIVFVVLLLFMGVRS 361

Query: 373  GIVIAVAIPLVLAATLAIMFYMGIELQRISLGALIIALGLLVDDAMIVVE--MMERKLEE 430
            G++I   + L +A TL +M    I +QRISLGALIIALG+LVD+A++V +  ++  + E 
Sbjct: 362  GVIIGFVLLLTVAGTLCVMLIDDIAMQRISLGALIIALGMLVDNAIVVTDGVLVRFQQEP 421

Query: 431  GLNRLDAASFAYSSTAFPMLTGTLITTAGFIPVGFAASTAGEYVRSLFFVVGIALVTSWF 490
              ++    S   ++T +P+L GT++    F  +G + S  GEY  SLF+V+  ++  SW 
Sbjct: 422  NADKQQVVSEVVNATKWPLLGGTVVGIFAFSAIGLSPSDMGEYAGSLFWVILYSMFLSWV 481

Query: 491  VAVYFTPWLGYMILKQRAHAGTHHDAYDTRFYRGVGHTVGWAVRHKAIVLLLTLGAFVGS 550
             AV  TP L +  L+ +A      +A  ++   G    + W + H+ +   + LG  V +
Sbjct: 482  FAVTVTPMLCHDFLRVKAPT---KEAKPSKLVTGYKAVLQWVLSHRVVSCAMLLGTLVAA 538

Query: 551  LWSFQFIPQSFFPQSSRPEILVDMWLPEGTAIKEVERQAKALEAKIMDDPDKKFVATFIG 610
            +W  QFIP  F P+S RP+ +VD++LP+G+ I+  E+   ++E  +        + +FIG
Sbjct: 539  VWGAQFIPPGFMPESQRPQFVVDVYLPQGSDIRRTEQVVASIEKDVTQKDGITNITSFIG 598

Query: 611  EGAPRFFLPLDQQLRNPNYAQLLVMSNGLEERERMIVKLRKILAEDFPTVRGKVDRLFLG 670
             G  RF L    + RNP+Y QLL+  +   +   ++ +L+  L   +P    KV +  LG
Sbjct: 599  GGGLRFMLTYSPEARNPSYGQLLIDIDDYTKIAPLVGELQNELDAKYPDASIKVWKFMLG 658

Query: 671  PPVGWAVQMRVVGPDRAEVRSIADQVKQRFEQQPNFGAVHDDWMEPVPAMKLVIDQDRAR 730
               G  ++    GPD   +R +A+Q K      PN  AV DDW + VP ++ V     A+
Sbjct: 659  RGGGKKIEAGFKGPDSHVLRQLAEQAKAIMHNDPNLIAVQDDWRQQVPVLQPVYSAQEAQ 718

Query: 731  ALGVSSQRVRQILQAATNGAAISDFRDGEETVSIVVREPDATRSLLSAV-NSVYIPTDIG 789
             LG+++Q +   +    NG  +  +R+G + + ++VR P+  R    A+ NS       G
Sbjct: 719  RLGLTTQEISAAIAQTLNGRNVGVYREGNDLIPLMVRAPENERHHERAIENSEVFSAQAG 778

Query: 790  GFVPASQIARVVPLLEQGIEWRR-DRLPTITVKATLPDGVEPTQVTMNLYNSMADL--RA 846
             ++P SQ+   V  + Q    RR +R+PTI V+A    GV    +T + +N++ +   + 
Sbjct: 779  RYIPVSQLVDSVDTVYQDALLRRINRMPTILVQADPAPGV----MTADAFNNVREKIEQI 834

Query: 847  KLPAGYKVEIQGGAEDAAESQQSIAAKAPIMLLVILVLLMIQLQHFGKAMLVLATGPLGI 906
            +LPAGY++   G  + + ++ + +A  AP     +++ ++       + +++  T P  +
Sbjct: 835  ELPAGYELIWYGEYKASKDANEGLALSAPYGFAAMILAVVFMFNALRQPLVIWMTAPFAV 894

Query: 907  IGAAMALLITGAPFGFVAILGVIALLGIIMRNSIILVDQIDQDIAAGHPRAEAIVGAAVR 966
            +G  + L+    PF F+AILG ++L+G++++N+I+LVDQ D +I AG     AI+ AAV 
Sbjct: 895  VGVTIGLIAFQTPFEFMAILGFLSLIGMMVKNAIVLVDQADAEIRAGKEAYFAIIDAAVS 954

Query: 967  RFRPIMLTALTAVLALIPISRGLFWGPMAYAMMGGILVATVLTILVLPAAYALFF 1021
            R RP++L A T +L + P+    F+  MA  +M G+L AT+LT++V+P  YA+ F
Sbjct: 955  RARPVLLGAFTTILGVAPLLVDPFFKSMAVTIMFGLLFATILTLVVIPLFYAVLF 1009