Pairwise Alignments

Query, 1052 a.a., AcrB/AcrD/AcrF family protein from Agrobacterium fabrum C58

Subject, 1049 a.a., efflux protein from Sinorhizobium meliloti 1021

 Score = 1625 bits (4207), Expect = 0.0
 Identities = 811/1047 (77%), Positives = 926/1047 (88%), Gaps = 2/1047 (0%)

Query: 8    SSTEEKHKFNLSRWAISHPSIARFLFGLIIVMGALGVINMGQKEDPDFTFRVMVVQSVWP 67
            +STE+K  FNLSRWAI HPSIARFL  LII+ G LG++ MGQ+EDP+FTFRVMVVQ+VWP
Sbjct: 3    ASTEDKKPFNLSRWAIGHPSIARFLLALIIITGGLGLLRMGQREDPEFTFRVMVVQAVWP 62

Query: 68   GASIDDMQNQVVNKIERKLQETPHLDWVKSYIRAGVAITTIQIKGDTNGADVADAFYQVR 127
            GASI +M++QVVNKIERKLQETPHLD+V+SY RAG AI T+QI+GDTN  +VADAFYQVR
Sbjct: 63   GASIQEMEDQVVNKIERKLQETPHLDFVRSYTRAGSAIITVQIEGDTNADEVADAFYQVR 122

Query: 128  KKVGDIKQDLPSGLLGPYFNDEFGDTYITLHAISGDGYSYPELKKFAIQARDMLIAMPGV 187
            KKVGDI  +LP G+LGPYFNDEFGDT+ITLH+ISGDG+SYPELK+FAI+ RDML+A PGV
Sbjct: 123  KKVGDIANELPEGVLGPYFNDEFGDTFITLHSISGDGFSYPELKRFAIEGRDMLLATPGV 182

Query: 188  EKAVILGDQPQKIFIDVSSKALAERGLTVVDIQNALQGQNDVDPAGSVETADRSVRISVE 247
            EK V+LGDQP+KI+ID+SSK LAERGLT  D++NA+ GQN+VD AGSV+T  RSVRISVE
Sbjct: 183  EKVVVLGDQPEKIYIDLSSKVLAERGLTFNDLRNAIAGQNNVDYAGSVDTGTRSVRISVE 242

Query: 248  GDVTTPAEIRELRLKAGDQVIRLGDIATVRDGLEDPFQRKFRVNGHDTVELGVVMAKGFK 307
            GDVT   +IRELRL+AGD+ IRLGDIATV  GLEDP+ RKFR NGHD+V++GVVMAKGF 
Sbjct: 243  GDVTKVEDIRELRLRAGDRTIRLGDIATVTSGLEDPYARKFRFNGHDSVQIGVVMAKGFN 302

Query: 308  VTDVGKGIEETYKRFEDTLPVGVEVTQISNQPEVVTEAVGEFTQALMEALGIVLIVSLIS 367
            VTDVGK +E TY RFE  LP GV V Q+SNQPEVVTEA+ EF+ AL+EAL IVLIVS +S
Sbjct: 303  VTDVGKAVEATYDRFESALPYGVSVDQVSNQPEVVTEAITEFSHALIEALIIVLIVSFLS 362

Query: 368  IGWRSGIVIAVAIPLVLAATLAIMFYMGIELQRISLGALIIALGLLVDDAMIVVEMMERK 427
            IGWRSG+VIA+AIPLVLAAT AIM+ +GI+LQRISLGALIIALGLLVDDAMIVVEMMERK
Sbjct: 363  IGWRSGLVIAIAIPLVLAATFAIMYELGIDLQRISLGALIIALGLLVDDAMIVVEMMERK 422

Query: 428  LEEGLNRLDAASFAYSSTAFPMLTGTLITTAGFIPVGFAASTAGEYVRSLFFVVGIALVT 487
            LEEGL ++DAASFAYSSTAFPMLTGTLITTAGFIPVGFA STAGEYVRSLF+VVGIALV 
Sbjct: 423  LEEGLEKIDAASFAYSSTAFPMLTGTLITTAGFIPVGFAESTAGEYVRSLFYVVGIALVV 482

Query: 488  SWFVAVYFTPWLGYMILKQRAHAGTHHDAYDTRFYRGVGHTVGWAVRHKAIVLLLTLGAF 547
            SWFVAVYFTPWLGYMILKQR HAGTHHD +DTRFYR +  TVGWAVRH+ +VLL+TL  F
Sbjct: 483  SWFVAVYFTPWLGYMILKQRHHAGTHHDVFDTRFYRRLRTTVGWAVRHRVVVLLMTLAIF 542

Query: 548  VGSLWSFQFIPQSFFPQSSRPEILVDMWLPEGTAIKEVERQAKALEAKIMDDPDKKFVAT 607
            V SLW+FQFIP++FFPQSSRPEILVD+WLPEGT+IKEVE+QAKALE ++MDD DK+F+AT
Sbjct: 543  VTSLWAFQFIPKNFFPQSSRPEILVDLWLPEGTSIKEVEKQAKALEERMMDDEDKRFIAT 602

Query: 608  FIGEGAPRFFLPLDQQLRNPNYAQLLVMSNGLEERERMIVKLRKILAEDFPTVRGKVDRL 667
            +IGEGAPRFFLPLDQQLRNPN+AQLLVM+     RER+I KLR ILAEDFP++R KVDRL
Sbjct: 603  YIGEGAPRFFLPLDQQLRNPNFAQLLVMAKDEPARERLIAKLRTILAEDFPSIRAKVDRL 662

Query: 668  FLGPPVGWAVQMRVVGPDRAEVRSIADQVKQRFEQQPNFGAVHDDWMEPVPAMKLVIDQD 727
            FLGPP GW VQMRV+GPDR EVR IADQVK +F++ P  GA+HDDW+EPVPAMKLVIDQD
Sbjct: 663  FLGPPTGWPVQMRVMGPDREEVRRIADQVKTKFQENPMLGAIHDDWLEPVPAMKLVIDQD 722

Query: 728  RARALGVSSQRVRQILQAATNGAAISDFRDGEETVSIVVREPDATRSLLSAVNSVYIPTD 787
            RARALG++SQR+RQ+LQAA +G  +  FRDGEETVSI+ REP   R LLSAV SVY+PTD
Sbjct: 723  RARALGITSQRIRQMLQAAMSGVPLDSFRDGEETVSIMAREPGGNRHLLSAVQSVYVPTD 782

Query: 788  IGGFVPASQIARVVPLLEQGIEWRRDRLPTITVKATLPDGVEPTQVTMNLYNSMADLRAK 847
             GGFVP SQIA+VVP++EQGIEWRRDRLPTITV+ TLPDGV+P  V M L++ +  LR  
Sbjct: 783  FGGFVPVSQIAKVVPVMEQGIEWRRDRLPTITVRGTLPDGVQPNDVAMQLFDELKGLRDG 842

Query: 848  LPAGYKVEIQGGAEDAAESQQSIAAKAPIMLLVILVLLMIQLQHFGKAMLVLATGPLGII 907
            L  GYKVEIQGGAED+AESQ SIAAKAPIML+VI++LLM+QLQHFGKAMLVLATGPLGII
Sbjct: 843  LAPGYKVEIQGGAEDSAESQASIAAKAPIMLVVIVILLMVQLQHFGKAMLVLATGPLGII 902

Query: 908  GAAMALLITGAPFGFVAILGVIALLGIIMRNSIILVDQIDQDIAAGHPRAEAIVGAAVRR 967
            GAA ALLI+GAPFGFVAILGVIALLGII+RNSIILVDQIDQDIAAG  R+EAI+GAAVRR
Sbjct: 903  GAAAALLISGAPFGFVAILGVIALLGIIIRNSIILVDQIDQDIAAGMERSEAIIGAAVRR 962

Query: 968  FRPIMLTALTAVLALIPISRGLFWGPMAYAMMGGILVATVLTILVLPAAYALFFGREPKA 1027
            FRPI+LTALTAVLALIPISRG+FWGP+AYAMMGGILVATVLTILVLPA YALFFG+EPK+
Sbjct: 963  FRPIILTALTAVLALIPISRGVFWGPLAYAMMGGILVATVLTILVLPAGYALFFGKEPKS 1022

Query: 1028 KKEDEKP-ASQGELFE-EHRDMPMAAE 1052
            +K D +P A+Q    E EH   P+AAE
Sbjct: 1023 RKTDPEPLAAQDNADEQEHYSTPLAAE 1049