Pairwise Alignments

Query, 466 a.a., two component sensor kinase from Agrobacterium fabrum C58

Subject, 853 a.a., Sensor histidine kinase from Sinorhizobium meliloti 1021

 Score =  211 bits (537), Expect = 8e-59
 Identities = 112/232 (48%), Positives = 157/232 (67%), Gaps = 7/232 (3%)

Query: 40  DGTILRANRAELDLLGFTAEEYIGRPISQFHADSDTIREI--LARLSGGEKLNRFPARLR 97
           DG +LR N A   +LG + E+ +      +  + D   E    AR   GE  + +  R R
Sbjct: 306 DGRLLRVNDAFCTMLGRSREQLLNMTFLDYTHEDDRDEEARCYARQVSGET-DTYAIRKR 364

Query: 98  A--KDGSIRYVEITSS-VQFRDGKFLNTRCFTIDVTDTVQLRRQLARKEQEMRQILEALP 154
           A   DG++ Y+++ SS V+ R G+F       +DVT+  ++  +    EQ MR +LEALP
Sbjct: 365 AVKADGTVIYLDVYSSTVRDRTGRFRYGVRVLLDVTEAKRMDDRRRESEQHMRDLLEALP 424

Query: 155 AAVYTTDAQGKITYYNRAATELSGREPVVGQDEWCVTYRLFTPDGQPLPHDQCPMAIALR 214
           AAVYTTDA+G+IT++N+AA E++GR P +G D+WCVT+RL+ PDG  LPHDQCPMA+ L+
Sbjct: 425 AAVYTTDAEGRITFFNKAAVEMAGRTPQIG-DKWCVTWRLYRPDGTYLPHDQCPMAVTLK 483

Query: 215 EKRAVRGVEAIAQRPDGTMVPFLPFPTPMFDEDGELIGAINMLVDISDRKTA 266
           E R VRG +A+A+RPDGT VPF+P+PTP+ D  G+L+GA+NMLVDISDR+ A
Sbjct: 484 EDRPVRGEQAVAERPDGTRVPFIPYPTPLHDVAGKLVGAVNMLVDISDREKA 535



 Score =  169 bits (429), Expect = 3e-46
 Identities = 93/251 (37%), Positives = 147/251 (58%), Gaps = 4/251 (1%)

Query: 21  EDYEDFFENGAVALHLVGEDGTILRANRAELDLLGFTAEEYIGRPISQFHADSDTIREIL 80
           +D EDFFEN A+ LH+V   G ILRAN+AEL+LLG+ A+EY+GR I++FHAD+  I +IL
Sbjct: 164 KDLEDFFENSAIGLHIVSAAGIILRANKAELELLGYPADEYVGRHIAEFHADAPVIGDIL 223

Query: 81  ARLSGGEKLNRFPARLRAKDGSIRYVEITSSVQFRDGKFLNTRCFTIDVTDTVQLRRQLA 140
            RLS GEKL+R+PARLRA+DGSI++V ITS+ +F DGKF+NTRCFT D+T   +      
Sbjct: 224 DRLSCGEKLDRYPARLRARDGSIKHVLITSNSRFEDGKFVNTRCFTTDITSLHETENAWR 283

Query: 141 RKEQEMRQILEALPAAVYTTDAQGKITYYNRAATELSGREPVVGQDEWCVTYRLFTPDGQ 200
             E+ +    +A    +  +DA G++   N A   + GR     +    +T+  +T +  
Sbjct: 284 ETEERLAATYQAATIGIAESDADGRLLRVNDAFCTMLGRS---REQLLNMTFLDYTHEDD 340

Query: 201 PLPHDQCPMAIALREKRAVRGVEAIAQRPDGTMVPFLPFPTPMFDEDGELIGAINMLVDI 260
                +C  A  +  +     +   A + DGT++    + + + D  G     + +L+D+
Sbjct: 341 RDEEARC-YARQVSGETDTYAIRKRAVKADGTVIYLDVYSSTVRDRTGRFRYGVRVLLDV 399

Query: 261 SDRKTAETNQK 271
           ++ K  +  ++
Sbjct: 400 TEAKRMDDRRR 410



 Score = 94.7 bits (234), Expect = 1e-23
 Identities = 55/157 (35%), Positives = 87/157 (55%), Gaps = 3/157 (1%)

Query: 150 LEALPAAVYTTDAQGKITYYNRAATELSGREPVVG--QDEWCVTYRLFTPDGQPLPHDQC 207
           L+A+P AVY  D +G +  YN  A EL GR+P +   ++ +C + RLF  DG P+ H +C
Sbjct: 37  LDAIPGAVYVCDHEGWLVGYNAEAAELWGRQPSLSAPRERFCGSQRLFLSDGSPMDHQEC 96

Query: 208 PMAIALREKRAVRGVEAIAQRPDGTMVPFLPFPTPMFDEDGELIGAINMLVDISDRKTAE 267
           PMA A++   + R  E I +RPDG+ +  L    P+ D  G + GAIN   DIS +K  E
Sbjct: 97  PMAEAIKTGVSTRNAEVIIERPDGSRIFALVNIRPLRDHRGVIQGAINCFQDISQQKRIE 156

Query: 268 TNQKVFLDELNHRVKNNMAMLYGLINSAARESRSDEA 304
                   +L    +N+   L+ ++++A    R+++A
Sbjct: 157 AEVNCKSKDLEDFFENSAIGLH-IVSAAGIILRANKA 192



 Score = 85.5 bits (210), Expect = 6e-21
 Identities = 86/345 (24%), Positives = 155/345 (44%), Gaps = 23/345 (6%)

Query: 117 GKFLNTRCFTIDVTDTVQLRRQLARKEQEMRQILEALPAAVYTTDAQGKITYYNRAATEL 176
           GK +      +D++D    R + A   + +  I+     A+ + D QG I  +N+ A  L
Sbjct: 517 GKLVGAVNMLVDISD----REKAAEYAERLASIVRFSDDAIVSKDTQGIIQTWNKGAERL 572

Query: 177 SG--REPVVGQDEWCVTYRLFTPDGQPLPHDQCPMAIALREKRAVRGVEAIAQRPDGTMV 234
            G   E V+G+        L  PD Q    ++  +   +R    +   E +  R DG+++
Sbjct: 573 FGYSAEEVIGKP----INILIPPDRQG---EEPGILERIRRDEHIDHYETVRIRKDGSLI 625

Query: 235 PFLPFPTPMFDEDGELIGAINMLVDISDRKTAETNQKVFLDELNHRVKNNMAMLYGLINS 294
                 +P+ D  G ++GA  +  DI++R+ +E ++K+ ++ELNHRVKN +A +  L   
Sbjct: 626 DVSLTVSPLKDARGRVVGASKIARDITERRRSEEHRKLLVNELNHRVKNTLATVQSL--- 682

Query: 295 AARESRSDEARRVLGDAAQRVGAMAAAQQTLYMEKDRTRVNAREFLQAVCSSARLAFSKE 354
           AA+  R   A    G    R+ A+A A   L  E  +   +  E L A  +   +    +
Sbjct: 683 AAQTFRGVNASEDFGRFQSRLVALARAHDVLTRESWQ-GADLGEVLHATINP--ICVEPQ 739

Query: 355 VALHIDVDAVQLPNDVTMPLALVLNELLTNAAKHGC--DDAGKCDVWITLSHHDGEFVLT 412
             +      ++L   + + L++  +EL TNAAK+G   +D G   V   +S+ +    L 
Sbjct: 740 QRVQASGPPLRLRPKMALALSMAFHELCTNAAKYGALTNDGGLIKVNWHVSNIESVSHLH 799

Query: 413 VR-DSGSGYNFEATGKRSSGTGLVS-GLVRQLRGSFSVAPGPGAM 455
           ++ +   G +     +   GT L+   L R+L G   +   P  +
Sbjct: 800 LQWEEIGGPSVMVPARTGFGTRLLERALARELGGKVDLVFAPSGV 844



 Score = 35.0 bits (79), Expect = 1e-05
 Identities = 31/113 (27%), Positives = 52/113 (46%), Gaps = 11/113 (9%)

Query: 41  GTILRANRAELDLLGFTAEEYIGRPISQFHADSDTIRE--ILARLSGGEKLNRFPARLRA 98
           G I   N+    L G++AEE IG+PI+          E  IL R+   E ++ +      
Sbjct: 560 GIIQTWNKGAERLFGYSAEEVIGKPINILIPPDRQGEEPGILERIRRDEHIDHYETVRIR 619

Query: 99  KDGSIRYVEIT-SSVQFRDGKFLNTRCFTIDVTDTVQLRRQLARKEQEMRQIL 150
           KDGS+  V +T S ++   G+ +       D+T+         R+ +E R++L
Sbjct: 620 KDGSLIDVSLTVSPLKDARGRVVGASKIARDITE--------RRRSEEHRKLL 664