Pairwise Alignments

Query, 466 a.a., two component sensor kinase from Agrobacterium fabrum C58

Subject, 856 a.a., PAS domain S-box-containing protein from Paraburkholderia bryophila 376MFSha3.1

 Score =  127 bits (320), Expect = 1e-33
 Identities = 139/484 (28%), Positives = 212/484 (43%), Gaps = 79/484 (16%)

Query: 17  KQHMEDYEDFFENGAVALHLVGEDGTILRANRAELDLLGFTAEEYIGRPISQFHADSDTI 76
           K   ++  DF EN A  +H V  DGT+L AN+AEL +LG+  EEY+GR I++FH D   I
Sbjct: 222 KLREKEITDFVENAAEGIHKVAADGTVLWANKAELAMLGYRWEEYVGRHIAEFHVDRAVI 281

Query: 77  REILARLSGGEKLNRFPARLRAKDGSIRYVEITSSVQFRDGKFLNTRCFTIDVTDTVQLR 136
             IL RL  GE +   PARLR +DG I++V I S+  F DG+   TRCFT D T+  +  
Sbjct: 282 ESILDRLGSGETIYDQPARLRCRDGRIKHVLIHSNGFFEDGQLRYTRCFTRDATERHERD 341

Query: 137 RQLARKEQEMRQILEALPAAVYTTDAQGKITYYNRAATELSGREPVVGQDEWCVTYRLFT 196
           + LA   Q  R +L A  AA   T         NR   EL+GR  + G            
Sbjct: 342 QALA---QRNRMLLNAPVAAALLTGPDLVFELANRRFCELAGRSDIEG---------TAF 389

Query: 197 PDGQPLPHDQCPMAIALREKRAV----RGVEAIAQRPDGTMVPFLPFPT----PMFDEDG 248
            D  P  HD   +A  L + RA      G E       G       F T    P+   +G
Sbjct: 390 ADAFPELHDS-ELARLLHQVRATGQPFTGGELRLFAGTGEQARQERFITINLEPLDGTEG 448

Query: 249 ELIGAINMLVDISDR-------------------KTAETN--QKVFLDELNHRVKNNMAM 287
           E+   + + VD+++                    K AE N  +  FL  L H ++N ++ 
Sbjct: 449 EVHSIVLVAVDVTEHVRNRQVLEQANLERSALLAKLAEANSAKDEFLAMLGHELRNPLSP 508

Query: 288 LYGLINSAAR--ESRSDEARRVLGDAAQRVGAMAAAQQTLYMEKDRTR------VNAREF 339
           +   +   +R  ++ +D  ++++    ++V  M      L      TR      +   E 
Sbjct: 509 IVMALELMSRRGDTTTDREQQII---RRQVHHMVRLVDDLLDVSRITRGRIDLDIGVVEI 565

Query: 340 LQAVCSS----ARLAFSKEVALHIDV-DAVQLPNDVTMPLALVLNELLTNAAKHGCDDAG 394
              V  +    + L   +   L +D+ D ++L  D ++ L  V++ LLTNAA++  D   
Sbjct: 566 DHVVAKAIEMVSPLLEQRGHTLRVDLEDGLRLEGD-SVRLTQVVSNLLTNAARYTGDGG- 623

Query: 395 KCDVWITLSHHDGE--FVLTVRDSGSG---------YNFEATGKRS-----SGTGLVSGL 438
             D+ +     +GE    ++V D+G+G         +     GKRS      G G+   L
Sbjct: 624 --DI-VVCGTREGEEHLCISVTDNGAGIAEELLPRIFELFFQGKRSLDRARGGLGIGLSL 680

Query: 439 VRQL 442
           VR +
Sbjct: 681 VRNI 684