Pairwise Alignments

Query, 411 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 321 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

 Score =  103 bits (256), Expect = 9e-27
 Identities = 72/186 (38%), Positives = 103/186 (55%), Gaps = 11/186 (5%)

Query: 190 GLIGSITLVFSVVIATTYEAIEKYRRYANLDPLTNLLNRRGL--DAVLASAQGERLKKPA 247
           GLIG  T +  +V     E  E+  + AN D LT L NRR L  D   A A+ +RL++P 
Sbjct: 135 GLIGVSTDITDIV-----ELREQLYQLANTDSLTQLCNRRKLWADFRAAFARAKRLRQPL 189

Query: 248 TAIILADIDHFKAINDRFGHSFGDLVIKRFGALVQSHTTTQGCVARLGGEEFAVLLPDTC 307
           + I + DID+FK IND+FGH  GD V+     L QS  +      R+GGEEF ++L +T 
Sbjct: 190 SCISI-DIDNFKLINDQFGHDKGDEVLCFLAKLFQSVISDHHFCGRVGGEEFIIVLENTH 248

Query: 308 LDDAIAAAEKMRRSFAAERWPCDRKESEFTASFGVALVEDGE-ALSTAFERADQFLYAAK 366
           ++ A   AE++R+ FA    P   +        GV+ +  G+  ++  + R+DQ LY AK
Sbjct: 249 VETAFHLAEQIRQRFAEH--PFFEQNEHIYLCAGVSSLHHGDHDIADIYRRSDQALYKAK 306

Query: 367 RMGRNR 372
           R GRNR
Sbjct: 307 RNGRNR 312