Pairwise Alignments

Query, 921 a.a., autotransporting virulence factor family member from Agrobacterium fabrum C58

Subject, 1411 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score =  183 bits (464), Expect = 8e-50
 Identities = 264/1000 (26%), Positives = 382/1000 (38%), Gaps = 181/1000 (18%)

Query: 47   ICDSGTSVGGLTDTGGNNTLLLPSAGTGTV----AGNVTFGAGADRIEIYSGTI--NGAV 100
            I  SG  +GG     G+  +   S G+G      AG     AGA    +Y+ +I  N  V
Sbjct: 468  IMTSGGEIGG---NEGSYAIAALSFGSGLASIEQAGGSATTAGAQSHALYALSIFGNTMV 524

Query: 101  VQGDGSDAFVISGGAVTGN---VQQGSGVD---DFRMTGG------TIQSLNQGDNLDTF 148
             Q  GS A V +G   +G       G G +   D ++T G      TI S      + + 
Sbjct: 525  TQAAGSSA-VATGAKASGLRALAGPGGGNEVTLDGKVTAGSAPAVHTIGSAGSKITIGSA 583

Query: 149  FMSDGR-----IIDAFDDGDVATMTGGRIGRVNMKLDDNVFDMSGGIIDRNLVTGFGNDT 203
               DG      I D   D D A  TGG           N      G +  ++V G GND 
Sbjct: 584  AEIDGSASGTAIRDGDSDLDAADETGG-----------NSTATLAGKVTGDVVMGLGNDI 632

Query: 204  IILSGGTIGGNISVSGGTDSVTVTGGVVGGSVLLSFGNDRFNWNGSGIIYGAIDLGADDD 263
            I L+GG + G++    G D +               G+D F W+G G    +   G   D
Sbjct: 633  INLTGGVLDGDVY---GDDRLATAAD----------GDDSFTWSG-GTWLSSFFGGNGSD 678

Query: 264  TATLTNLANAHIGATTQISGGLG-------TDSLTMSNVK-TGGVARFDSWETINLTNDT 315
            TAT++  A ++ G    + GG         TD L +S V  +   A   +WE + L    
Sbjct: 679  TATVS--AQSYDGTHHYLDGGDDVSTADGWTDRLNLSGVTASANGANIVNWEIVTLDAAD 736

Query: 316  ELVFDGTLTLG------------------DSGTGTGTLTIDSASTVYGGGQNGRVSAFSA 357
              + DG L  G                  D+    G + ID  S     G++     +S 
Sbjct: 737  VTILDGALEAGSEPETGLFLTNGSVLNGSDAFALAGNMAIDGTSQFIAFGEDIANGVYSI 796

Query: 358  GAFANLVNSGRIDLTNGGGGASDTFTVSGNYVG-NGGQIFLDTVLGTDGSASDKLVIDGG 416
                NLVN+G +D+ +GG G  D  +V GNY G     +++DT LG D S +D + + GG
Sbjct: 797  SG--NLVNAGTVDMQDGGTG--DVLSVGGNYTGAENSTVYIDTYLGDDASPTDHITV-GG 851

Query: 417  AASGSTGMNVVNAGGSGARTTADGIMVVQATNGATTAGGAFAL-----------NSRVAA 465
              +GST +++ NAGG  A+T A GI VV     A  + G F L            + +  
Sbjct: 852  DTAGSTAISIGNAGGPSAQTVA-GIRVVGV---AGASSGTFVLANANSEIKETGEAAITR 907

Query: 466  GAYEYYLFKGGVSAGTQDNWYLRSTIVPG-SGAVAGAPDPLQPNTTPEAEAPDITGA--- 521
            GAY Y L +        D+W+L+ST+    +G   G    + P T         TG    
Sbjct: 908  GAYAYALRQVD-----NDDWFLQSTLAEDDTGPDTGGEQAVDPETEGGETVDPGTGGGET 962

Query: 522  -PPASQLPPTPLP-TEGSSTTEP-------TDP------TPPINAGDPQPVAPPT----- 561
              P +    T  P T G  T +P        DP      T     G  + V P T     
Sbjct: 963  VDPGTGGGETVDPGTGGGETVDPGTGGGETVDPGTGGGETVDPGTGGGETVDPGTGGGET 1022

Query: 562  --PQAAGTASPPPAPPVPPTTLAMIPSASAIPPTPGATRVI-------ADIVPLYRVEVP 612
              P   G  +  P      T          + P  G    +         ++P Y   VP
Sbjct: 1023 VDPGTGGGETVDPETGGGETVDPGTGGGETVDPGTGGGETVDPGTGGGETVIPSYNQGVP 1082

Query: 613  TYSA-VQPLAQYLALSTLGTFHERRGEQA-LLQGDGWMP---------------TSWART 655
             Y    + L  ++ L TL       GE+   L+  G +P               T WAR 
Sbjct: 1083 VYETYARNLLGFIQLPTLR--RRASGERVPALRSCGSVPLNVEGNQTAACAEDNTVWARI 1140

Query: 656  FGQ--NTEMKWDGTVSPSFDGNLFGLQAGQDLLGRETEAGGFDRFGLFVGYSRMNGDIKG 713
             G   + E +  G     +D   + LQAG D L   +  G     GL   Y  +N D+  
Sbjct: 1141 DGTRAHVEPEESGARVSEYDSRSWLLQAGIDALLHSSGKGELIG-GLTAHYGGINTDVS- 1198

Query: 714  QALGWNNLAVGEVDIGGTSFGAYWTHVGAQGWYLDAVLMGTWFSGDATSRAGESV--NID 771
                 +    G +D  G   GA  T  G  G+YLD     T F  D  S     +    D
Sbjct: 1199 -----SFYGDGSIDTRGYGLGATLTWYGQNGFYLDGQGQLTRFDSDLDSDILGRLADGND 1253

Query: 772  GSSVAASLEGGYPIALTEDWTLEPQAQIIWQKLSLDDEADRFSS-VAFDSDNAVTGRLGV 830
            G   A S+E G+ I L + W L PQAQ++   ++ DD  D + + V+ D  N++ GR+G+
Sbjct: 1254 GLGYAVSIEAGHRIGLGDTWALTPQAQLVNTSVNFDDFVDPYGARVSLDDGNSLRGRIGL 1313

Query: 831  RLQGNYQ-----TDSGLIQPYLKANIWHGFSSDQMTRFDNDPIVTETGGTSLEIG-GGLV 884
             L    Q      D    + Y   +++  F  D            E      EIG GG  
Sbjct: 1314 ALDREQQWQGAEGDGRSSRLYGTIDLYREFLGDTRADVSGVSFGIEADDWIGEIGIGGSY 1373

Query: 885  ASLTEKVSVFATVDYTTNL---GGERKRAIEGNIGLNIKW 921
                +K S++     +T L   GG    A+  ++GL +K+
Sbjct: 1374 NWGDDKYSLYGEARASTGLSDFGG--SYAVRASVGLKMKF 1411



 Score = 36.6 bits (83), Expect = 1e-05
 Identities = 67/305 (21%), Positives = 110/305 (36%), Gaps = 53/305 (17%)

Query: 190 IIDRNLVTGFGNDTIILSGGTIGGNISVSGGTDSVTVTGGVVGGSVLLSFGN---DRFNW 246
           +++++ +T  G   I +      GN        S+   G    G   +S GN    R + 
Sbjct: 304 VLEKSKITTRGEGAIGIRAEAGDGNAVTEVTKGSIATAGASAIGLAAISQGNMGEARVSL 363

Query: 247 NGSGIIYGAIDLGADDDTATLTNLANAHIGATTQISGGLGTDSLTMSNVKTGG------- 299
           +G     G +  G D+    +         AT + +GG  T  L   NVKT G       
Sbjct: 364 DG-----GDVSTGGDNAEGLI---------ATAKGAGGTATARLVDGNVKTAGRDAEGLI 409

Query: 300 VARFDSWETINLTNDTELVFD-GTLTLGDSGTG-------------TGTLT-IDSASTVY 344
               D     ++  D  ++   G++T    G G             TG  T +  A T+ 
Sbjct: 410 AHAGDESIPTSINADASVIMQAGSITTTGDGAGGMIAETDIGPTPSTGKATAVQRAGTIM 469

Query: 345 --GGGQNGRVSAFSAGAFANLVNSGRIDLTNGGGGASDTFTVSGNYVGNGGQIFLDTVLG 402
             GG   G   +++  A +    SG   +   GG A  T   + ++      IF +T++ 
Sbjct: 470 TSGGEIGGNEGSYAIAALS--FGSGLASIEQAGGSA--TTAGAQSHALYALSIFGNTMV- 524

Query: 403 TDGSASDKLVIDGGAASGSTGMNVVNAGGSGARTTADGIMVVQATNGATTAGGAFALNSR 462
              +A    V  G  AS   G+  +   G G   T DG +   +     T G A    S+
Sbjct: 525 -TQAAGSSAVATGAKAS---GLRALAGPGGGNEVTLDGKVTAGSAPAVHTIGSA---GSK 577

Query: 463 VAAGA 467
           +  G+
Sbjct: 578 ITIGS 582