Pairwise Alignments

Query, 535 a.a., ABC transporter nucleotide binding/ATPase (oligopeptide) from Agrobacterium fabrum C58

Subject, 556 a.a., ABC transporter for D-Raffinose, ATPase component (from data) from Sinorhizobium meliloti 1021

 Score =  293 bits (749), Expect = 2e-83
 Identities = 191/520 (36%), Positives = 277/520 (53%), Gaps = 20/520 (3%)

Query: 10  VEAKGEEGWSPILHGINLEVRRGEVVGLIGESGAGKSTLGLAALGFAHAGLRFAG-GRVL 68
           V  K E G    +  ++ ++ RGE V ++GESG+GKS      +G        A   R+ 
Sbjct: 33  VSFKVENGTVQAVKDVSFQLYRGETVAIVGESGSGKSVTARTVMGLLSKRATIAPQARIE 92

Query: 69  VENVDLLRLTERERSAYRGRRVAYVAQSAAASFNPAWQLLDQFCEGPAIHGTASRPDCEI 128
            +  D+L+ ++RER A RG R++ + Q   +S NP + +  Q  E    H   SR     
Sbjct: 93  YDGRDVLKFSKRERRALRGDRISMIFQEPMSSLNPVYTIGSQIIEAIRAHRRVSRRAAAE 152

Query: 129 LARQLYASMQLPDAANFGLRFPHQVSGGQLQRAMVAMAMACKPDLIVFDEPTTALDVTTQ 188
            A +L   +Q+PD      ++PHQ+SGGQ QR M+AMA+A  PD+++ DEPTTALDVT Q
Sbjct: 153 RALELLRHVQIPDPEARLNQYPHQLSGGQRQRVMIAMALANDPDVLIADEPTTALDVTVQ 212

Query: 189 IGVLTAIRSAVETSETAAIYITHDLAVVAQMADRIKVMRHGREVEEAPTRQIMQSPREDY 248
             +L  IR   +    A I ITHDL VV Q +D + VM+ G   E   T  +   P+  Y
Sbjct: 213 AQILNLIRKLQQELGMAVILITHDLTVVRQFSDYVYVMQLGEVKEHNTTEALFADPQHAY 272

Query: 249 TRSLWAVREFHRPERRLERNDAPV-ISINNVTASY-----GHFD-------VLRDVAFEI 295
           TR L +             +DAP+ +   NV  S+     G F         +  ++  +
Sbjct: 273 TRRLLSSEP--SGSANPLPDDAPILLDGRNVRVSFTLKKGGFFRPEFKELVAVDGLSLNL 330

Query: 296 PRGATVAVVGESGSGKSTAARVVTGLLPPRIGSITLNGEVLPPSFSRRSREQLRKIQMIY 355
            R  T+ +VGESGSGK+T  + +  LL    G I   GE +     +  R    KIQ+++
Sbjct: 331 RRHETLGLVGESGSGKTTFGQALIRLLNTDGGEIYFEGEPIHDKDRKGMRPLRSKIQIVF 390

Query: 356 QMADTALNPRQSIRQILCRPLQFYVGLKGAALERRLGELMEQIELS--PRQFLHRVPGEL 413
           Q   ++LNPR S+ QI+   L   V   G   + RL  + + +  +  P   L R P E 
Sbjct: 391 QDPFSSLNPRMSVGQIIEEGL--IVNGMGENRKDRLKRVEDALVSAGMPSNILSRFPHEF 448

Query: 414 SGGQKQRIGIARALAANPEIIICDEVTSALDQLVAEGILRLLSRLQDETGISYMFITHDI 473
           SGGQ+QRI IARA+A  PE I+ DE TSALD  V   I+ LL RLQDE G+SY+ I+HD+
Sbjct: 449 SGGQRQRIAIARAVALEPEFILLDEPTSALDLSVQAQIIELLRRLQDERGLSYLVISHDL 508

Query: 474 DTVRAIADDVVVMKSGTVQDKGSKAEVMDPPRHHYTRQLL 513
             VRA+   VVVM+ G + ++G  +EV++ P+  YT +L+
Sbjct: 509 KVVRALCHRVVVMQDGKIVEEGPVSEVLNNPKTAYTERLV 548



 Score =  168 bits (426), Expect = 4e-46
 Identities = 108/273 (39%), Positives = 160/273 (58%), Gaps = 18/273 (6%)

Query: 261 PERRLERN---DAPVISINNVTASY----GHFDVLRDVAFEIPRGATVAVVGESGSGKST 313
           PE R +R+   + PVI    V  S+    G    ++DV+F++ RG TVA+VGESGSGKS 
Sbjct: 11  PEERRDRDMKDERPVIDARKVAVSFKVENGTVQAVKDVSFQLYRGETVAIVGESGSGKSV 70

Query: 314 AARVVTGLLPPRI-----GSITLNG-EVLPPSFSRRSREQLR--KIQMIYQMADTALNPR 365
            AR V GLL  R        I  +G +VL   FS+R R  LR  +I MI+Q   ++LNP 
Sbjct: 71  TARTVMGLLSKRATIAPQARIEYDGRDVL--KFSKRERRALRGDRISMIFQEPMSSLNPV 128

Query: 366 QSIRQILCRPLQFYVGLKGAALERRLGELMEQIEL-SPRQFLHRVPGELSGGQKQRIGIA 424
            +I   +   ++ +  +   A   R  EL+  +++  P   L++ P +LSGGQ+QR+ IA
Sbjct: 129 YTIGSQIIEAIRAHRRVSRRAAAERALELLRHVQIPDPEARLNQYPHQLSGGQRQRVMIA 188

Query: 425 RALAANPEIIICDEVTSALDQLVAEGILRLLSRLQDETGISYMFITHDIDTVRAIADDVV 484
            ALA +P+++I DE T+ALD  V   IL L+ +LQ E G++ + ITHD+  VR  +D V 
Sbjct: 189 MALANDPDVLIADEPTTALDVTVQAQILNLIRKLQQELGMAVILITHDLTVVRQFSDYVY 248

Query: 485 VMKSGTVQDKGSKAEVMDPPRHHYTRQLLASVP 517
           VM+ G V++  +   +   P+H YTR+LL+S P
Sbjct: 249 VMQLGEVKEHNTTEALFADPQHAYTRRLLSSEP 281