Pairwise Alignments

Query, 535 a.a., ABC transporter nucleotide binding/ATPase (oligopeptide) from Agrobacterium fabrum C58

Subject, 533 a.a., oligopeptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  292 bits (747), Expect = 2e-83
 Identities = 183/532 (34%), Positives = 287/532 (53%), Gaps = 28/532 (5%)

Query: 2   LLKIDNLKVEAKGEEGWSPILHGINLEVRRGEVVGLIGESGAGKSTLGLAALGFAHAGLR 61
           +L +  LKV+    +G    + GI+L+VR GE + ++GESG+GKS   +  +G   A   
Sbjct: 8   ILAVRGLKVDFYTPDGTVEAVKGIDLDVRSGETLAVVGESGSGKSQTMMGIMGLL-AKNG 66

Query: 62  FAGGRVLVENVDLLRLTERERSAYRGRRVAYVAQSAAASFNPAWQLLDQFCEGPAIHGTA 121
              G       +L+ L  +  +  RG ++  + Q    S +P + +  Q  E    H   
Sbjct: 67  TVTGSARYRGQELVGLAPKALNKVRGSKITMIFQEPMTSLDPLYTIGRQIAEPIVHHRGG 126

Query: 122 SRPDCEILARQLYASMQLPDAANFGLRFPHQVSGGQLQRAMVAMAMACKPDLIVFDEPTT 181
           S  +      +L   + +P+       +PH++SGGQ QR M+AMA+A +PD+++ DEPTT
Sbjct: 127 SFKEARRRVLELLELVGIPEPGRRIDSYPHELSGGQRQRVMIAMALANEPDILIADEPTT 186

Query: 182 ALDVTTQIGVLTAIRSAVETSETAAIYITHDLAVVAQMADRIKVMRHGREVEEAPTRQIM 241
           ALDVT Q  +L  ++S       A + ITHDL +V   ADR+ VMR G  VE+  T  I 
Sbjct: 187 ALDVTIQAQILDLLKSLQRRFGMAIVLITHDLGIVKYFADRVAVMRRGEVVEQGMTADIF 246

Query: 242 QSPREDYTRSLWAVREFHRPERRLERNDAPVI-SINNVTASY-----------GHFDVLR 289
           + P+ DYTR L       R  +    ++AP+I    NV   Y             F  + 
Sbjct: 247 ERPKGDYTRMLLEAEPSGR--KASPPDNAPIILEGRNVAVDYTIPGGLFRGASAAFRAVD 304

Query: 290 DVAFEIPRGATVAVVGESGSGKSTAARVVTGLLPP----RIGSITLNGEVLPPSFSRRSR 345
            V   + +G T+ +VGESGSGKST  R +  LLP     R GS  ++G      F R + 
Sbjct: 305 GVNLRLRQGQTIGIVGESGSGKSTLGRALLRLLPSSGYYRFGSTDISG------FDRGAM 358

Query: 346 EQLRK-IQMIYQMADTALNPRQSIRQILCRPLQFY-VGLKGAALERRLGELMEQIELSPR 403
             LR+ +Q+++Q    +L+PR+++ +I+   L  +   L  A  +RR    ++++ L P 
Sbjct: 359 RPLRRQLQLVFQDPYGSLSPRRTVGEIITEGLHVHEPDLSRADRDRRAIAALKEVGLDPA 418

Query: 404 QFLHRVPGELSGGQKQRIGIARALAANPEIIICDEVTSALDQLVAEGILRLLSRLQDETG 463
              +R P E SGGQ+QRI IARA+   P+++I DE TSALD+ V   ++ LL  LQ++ G
Sbjct: 419 S-RNRYPHEFSGGQRQRIAIARAIILKPKVVILDEPTSALDRSVQGQVIELLRDLQEKHG 477

Query: 464 ISYMFITHDIDTVRAIADDVVVMKSGTVQDKGSKAEVMDPPRHHYTRQLLAS 515
           +SY+FI+HD+  V+A++D V+VMK+G + ++G    + D PR  YT+ L+ +
Sbjct: 478 LSYIFISHDLSVVKAMSDYVIVMKNGRIVEEGETDAIFDAPREPYTKTLIGA 529



 Score =  142 bits (357), Expect = 4e-38
 Identities = 90/241 (37%), Positives = 137/241 (56%), Gaps = 7/241 (2%)

Query: 283 GHFDVLRDVAFEIPRGATVAVVGESGSGKSTAARVVTGLLPPR---IGSITLNGEVLPPS 339
           G  + ++ +  ++  G T+AVVGESGSGKS     + GLL       GS    G+ L   
Sbjct: 23  GTVEAVKGIDLDVRSGETLAVVGESGSGKSQTMMGIMGLLAKNGTVTGSARYRGQELV-G 81

Query: 340 FSRRSREQLR--KIQMIYQMADTALNPRQSIRQILCRPLQFYVGLKGAALERRLGELMEQ 397
            + ++  ++R  KI MI+Q   T+L+P  +I + +  P+  + G       RR+ EL+E 
Sbjct: 82  LAPKALNKVRGSKITMIFQEPMTSLDPLYTIGRQIAEPIVHHRGGSFKEARRRVLELLEL 141

Query: 398 IEL-SPRQFLHRVPGELSGGQKQRIGIARALAANPEIIICDEVTSALDQLVAEGILRLLS 456
           + +  P + +   P ELSGGQ+QR+ IA ALA  P+I+I DE T+ALD  +   IL LL 
Sbjct: 142 VGIPEPGRRIDSYPHELSGGQRQRVMIAMALANEPDILIADEPTTALDVTIQAQILDLLK 201

Query: 457 RLQDETGISYMFITHDIDTVRAIADDVVVMKSGTVQDKGSKAEVMDPPRHHYTRQLLASV 516
            LQ   G++ + ITHD+  V+  AD V VM+ G V ++G  A++ + P+  YTR LL + 
Sbjct: 202 SLQRRFGMAIVLITHDLGIVKYFADRVAVMRRGEVVEQGMTADIFERPKGDYTRMLLEAE 261

Query: 517 P 517
           P
Sbjct: 262 P 262