Pairwise Alignments

Query, 323 a.a., ABC transporter membrane spanning protein (oligopeptide) from Agrobacterium fabrum C58

Subject, 336 a.a., Binding-protein-dependent transport systems inner membrane component from Pseudomonas syringae pv. syringae B728a

 Score =  182 bits (461), Expect = 1e-50
 Identities = 114/332 (34%), Positives = 174/332 (52%), Gaps = 21/332 (6%)

Query: 13  VAVRLGLGLFTLLFISLLIFLAVGLLPGDIAQQVLGQSAT-PETVAAFRRELGLDQPLSW 71
           +A R+GL + T   I+LL F  + L+PGD  + ++G+    PE  A     LGL++PL  
Sbjct: 5   IARRVGLLIPTFFGITLLTFALIRLIPGDPVEVMMGERRVDPEMHAQAMERLGLNKPLYA 64

Query: 72  RYLTWIGGILTGDFGHSLANGRPVAELLSARLGNTLFLAAYAAAIAIPLAVLLGLLAAMW 131
           +Y+ +IG +  GD G SL     V    ++    TL L+  A   A  L +L G++AA+ 
Sbjct: 65  QYIDYIGKLAQGDLGESLRTRTSVWSEFTSLFPATLELSLAALIFAGILGLLAGVIAALK 124

Query: 132 RGTWFDRVINVMTLSAISFPEFFVAYILMFWLSVHMGWFPSVADPGAAPDL--------- 182
           RG+ FD  +  ++L+  S P F+   IL+ + SV +GW P         D+         
Sbjct: 125 RGSLFDHGVMGISLAGYSMPIFWWGLILIMFFSVTLGWTPVSGRIDLLYDIPPVTGFMLI 184

Query: 183 -----------FDMLRRAFLPAITLVLVVTAHMMRMTRAAVLNVLAEPYVIMARLKGASR 231
                       D L    LPAI L  +  A + RMTR+++L VL E YV  AR KG S 
Sbjct: 185 DTLLSDEQGSFLDALHHMILPAIVLGTIPLAVIARMTRSSMLEVLREDYVRTARAKGLSP 244

Query: 232 WRIITRHALPNALAPISNVIAINVAWLITGVVIVEVVFVYPGLGQLMVDSVTNRDMPVVQ 291
            R++  H L NAL P+  V  + +  L+ G V+ E +F +PG+G+ +++++  RD PVVQ
Sbjct: 245 ARVVFVHGLRNALIPVLTVFGLQIGTLLAGAVLTETIFSWPGIGKWLIEAIGARDYPVVQ 304

Query: 292 ACALIFAAVYILLNLLADVLAIATNPRLLHPR 323
              L+ A + IL+N + D+L    NPR+ H R
Sbjct: 305 NGILLIACLVILVNFVVDILYGFANPRIRHQR 336