Pairwise Alignments

Query, 322 a.a., AraC family transcriptional regulator from Agrobacterium fabrum C58

Subject, 311 a.a., Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain from Pseudomonas fluorescens FW300-N2E2

 Score = 92.0 bits (227), Expect = 2e-23
 Identities = 80/308 (25%), Positives = 137/308 (44%), Gaps = 18/308 (5%)

Query: 12  LLFESFSNMVLASAIEPLRAA-RDLSGRQLFSWQLCSLDGNAIISSSRAAIAADLPLSRV 70
           +LF  F  + +A  +E    A R L+  Q +       +   + +S+  ++ AD+ + + 
Sbjct: 2   VLFPDFLLLDMAGPLEVFSIANRYLAADQRYQLLTLGTERGPLRASNGVSVQADIHIDQA 61

Query: 71  GATDALILV-AGYGIRNHLNQESAAAVRRKARGLPIVGGLDTGAWLLARIGLLAGRRATI 129
            A   ++LV  G G  N  +      +R  A+     G + TGA++L   GLL G R T 
Sbjct: 62  WAAYHVLLVPGGPGAYNDQHPGLHTWLRAAAQRATRYGSICTGAFVLGEAGLLDGYRVTT 121

Query: 130 HWMEKKEFAENFPEVRV-TDAPYVVDGNIVTCGDAQSVLTWSLDLIGKHADEALRFDVAN 188
           HW   +   + FP+  V TD  ++ D  ++T G   + +  +L ++ +     +  DVA 
Sbjct: 122 HWHYTERLIQRFPKSLVETDKIFLQDRRLITSGGVTAGIDLALSIVAQDHGRKVALDVAK 181

Query: 189 MFGGVQKSAERTLARGLSGRMSDHGLPAALQRAIVV-----MRETAEQPLKLPDIADRVA 243
           +   V K       +G   + S      + Q + +      + E  E+P  +  +A   A
Sbjct: 182 VLLVVMKR------QGGQAQFSPSVAAVSTQESAITRVQNHVMEHLEEPFTIERMAALAA 235

Query: 244 VSERSLDRLFHRYLGMSAGQYYSQIRLSHARALALETNLTLYEIAFRTGFSSPSTLARAY 303
           +S R   R+F R + M+  ++    R+  AR L   T+L L  +AFR+GF S     R  
Sbjct: 236 MSARHFARVFAREVKMTPMEFLQGARIDRARQLLETTDLPLKTVAFRSGFGS----VRHM 291

Query: 304 RLKFGETL 311
           R  FGE L
Sbjct: 292 RFLFGEKL 299