Pairwise Alignments

Query, 303 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 296 a.a., DMT family transporter from Methanococcus maripaludis S2

 Score = 81.6 bits (200), Expect = 2e-20
 Identities = 79/288 (27%), Positives = 135/288 (46%), Gaps = 20/288 (6%)

Query: 6   LLFSLLAVLIWVGNTIVSKLAAGAIAPGTIAFERWFIAFVILTPLVYRDAWRHRRTIAAH 65
           +L   L V+ W  + + +K+    I P TI F R  IA VIL   + R+  ++ +    +
Sbjct: 8   ILLMFLTVIFWGISFVSTKIILEFIPPITIGFIRVVIAAVILIFFI-RNFTKYSKEDFVY 66

Query: 66  LPKLILLGLLGMAACQGLGYYAAGLTTATNMAIMLSLVPLLTLILSAVFLAERPSSLAVI 125
              ++L G LG+ +       A   TTATN +++ + VP+  LI+S +   + PS +   
Sbjct: 67  ---IVLAGFLGITSYYLFENVALKYTTATNASLIAATVPIFYLIVSDIVEKKIPSKIKYF 123

Query: 126 GGIISLSGIFIVLGQGDPSRLLSQGVGRGDAMMLAAVLAYAGYGILLRRWA--IPLATWT 183
           G +I L G+FI++  G   + + +    GD +M  AV  +  Y  ++++      L    
Sbjct: 124 GSLIGLFGVFILILNG---KFVLELNPLGDILMFGAVCTWVLYTFVIQKLQKHDDLKVTR 180

Query: 184 SIYVQIGAAVVLLVPSYLLSAP-------SALTLPNTAM-VLYAAIPGSILAPFVWMTAV 235
            I + IGA  V  +P  ++          + L  P  A  +LY AI  S +A   W  A+
Sbjct: 181 DITL-IGA--VFFIPFTIMELGYNGMFEFTILLNPYIAFSLLYLAIFCSAIAYLFWNMAI 237

Query: 236 KHLGAARTAIFMNLIPIFTAIVAAIFLGEALYIYHLLGGGMTVAGIIL 283
           +  GA+ T   + +IPI   I  AI L     IY ++G  + + G+ +
Sbjct: 238 RLAGASTTTNGVYIIPIVAMITDAIILKNIPNIYAIIGAVLVLFGVYI 285