Pairwise Alignments

Query, 120 a.a., ECF family RNA polymerase sigma factor from Agrobacterium fabrum C58

Subject, 193 a.a., RNA polymerase sigma factor RpoE from Pseudomonas stutzeri RCH2

 Score = 44.3 bits (103), Expect = 8e-10
 Identities = 37/131 (28%), Positives = 59/131 (45%), Gaps = 13/131 (9%)

Query: 2   LRGLRALHGFTPGTALKSWLFTILRNTFCTRYKVSKRECVGLPVGIEQT----------- 50
           ++  RAL  F   +A  +WL+ I  NT         R      V  E             
Sbjct: 56  IKAYRALANFRGDSAFYTWLYRIAINTAKNHLVARGRRPPDSDVSSEDAEFYEGDHALKD 115

Query: 51  MSTPASREWHVQHQEAM-RAIRDLDKDQKKALLLVA-GGTSYSDAAAICGCRVGTIKSRV 108
           + +P       + ++ + R I+ L +D + AL L    G SY D A++  C VGT++SR+
Sbjct: 116 IESPERSLLRDEIEDTVHRTIQLLPEDLRTALTLREFDGLSYEDIASVMQCPVGTVRSRI 175

Query: 109 NRARESLRRNL 119
            RARE++ + L
Sbjct: 176 FRAREAIDKAL 186