Pairwise Alignments

Query, 120 a.a., ECF family RNA polymerase sigma factor from Agrobacterium fabrum C58

Subject, 190 a.a., RNA polymerase sigma factor RpoE from Vibrio cholerae E7946 ATCC 55056

 Score = 43.1 bits (100), Expect = 2e-09
 Identities = 35/131 (26%), Positives = 58/131 (44%), Gaps = 13/131 (9%)

Query: 2   LRGLRALHGFTPGTALKSWLFTILRNTFCTRYKVSKRECVGLPVGIEQT----------- 50
           ++  RA+  F   +A  +WL+ I  NT         R      V  E+            
Sbjct: 56  IKAYRAIPTFRGESAFYTWLYRIAVNTAKNHIVAQSRRPPASDVDAEEAEFYEGGDALKE 115

Query: 51  MSTPASREWHVQHQEAM-RAIRDLDKDQKKALLL-VAGGTSYSDAAAICGCRVGTIKSRV 108
           +S P +     + ++ +  AI  L  D K A+ L    G SY + A +  C VGT++SR+
Sbjct: 116 LSNPENITLSKELKKTVFDAIDALPDDLKTAMTLRELDGLSYEEIAEVMDCPVGTVRSRI 175

Query: 109 NRARESLRRNL 119
            RARE++ + +
Sbjct: 176 FRAREAVEKKI 186