Pairwise Alignments

Query, 120 a.a., ECF family RNA polymerase sigma factor from Agrobacterium fabrum C58

Subject, 180 a.a., RNA polymerase ECF sigma factor from Sinorhizobium meliloti 1021

 Score = 54.7 bits (130), Expect = 6e-13
 Identities = 38/119 (31%), Positives = 60/119 (50%), Gaps = 8/119 (6%)

Query: 3   RGLRALHGFTPGTALKSWLFTILRNTFCTRYKVSKRECVGLPVGIEQTMSTPASR----- 57
           R L +   F PGT   +W+F ILRN +  +  V +++  G+   I +      S      
Sbjct: 43  RALASAERFEPGTRFDAWIFRILRNLWIDQ--VRRQKTAGVQDDITERHDIAGSSGERET 100

Query: 58  EWHVQHQEAMRAIRDLDKDQKKALLLVA-GGTSYSDAAAICGCRVGTIKSRVNRARESL 115
           E  +  +    AI +L  +Q++ +LLV     SY +AA + G  +GT+ SR+ RAR SL
Sbjct: 101 EARLTLKTVAEAITELPDEQREVVLLVCVEELSYREAADVMGIPIGTVMSRLMRARRSL 159