Pairwise Alignments

Query, 239 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 229 a.a., helix-turn-helix domain-containing protein from Phaeobacter inhibens DSM 17395

 Score =  129 bits (325), Expect = 4e-35
 Identities = 84/229 (36%), Positives = 119/229 (51%), Gaps = 1/229 (0%)

Query: 1   MARSDRLFRLLQALRTLPSPVTAARLAEETDVSLRSLYRDIESLRAAGAVIDGERGFGYR 60
           M R+DRLF ++Q LR   +   A  +AE  +VS R++YRD+++L A+G  ++G RG GY 
Sbjct: 1   MRRTDRLFDIIQILRD-GNLHRAQDIAERLEVSTRTIYRDMDTLVASGVPVEGARGVGYM 59

Query: 61  LTEDIALPPQTFTRLEIEALVLGLAEVRHMGEPALAAAAGAVLSKVTATLPDRLQRQTLH 120
           + E I LPP T T  E+EAL LG+A V    +P L AAA  + +KV A LP+R   +   
Sbjct: 60  VREAITLPPLTLTSEELEALNLGMAIVAEAADPDLKAAAERLAAKVDAVLPERTIAEADA 119

Query: 121 AASQVYRFERRDPPLANVGLLREACWQERAVVISYVDAEQRRTDRQVLPLAIVYLERTLV 180
               VY F         +  LR A    + + ++Y   +   T+R + PL + Y  R   
Sbjct: 120 WKFAVYPFANVARGFTQMPTLRAAIKARQKLHLTYRRIDDALTERVIRPLHMEYWGRVWT 179

Query: 181 LLAWCCLRQDFRKFRVDRIADINMTEESFRPRRVQLLRDFVAILNAGAP 229
           L AWC  R+DFR FRVD I       E F     + L D+    +  AP
Sbjct: 180 LTAWCETREDFRVFRVDLIEAATPLPELFVDEPGKRLMDYQPYADTSAP 228