Pairwise Alignments

Query, 239 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 230 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  144 bits (362), Expect = 2e-39
 Identities = 89/229 (38%), Positives = 125/229 (54%), Gaps = 13/229 (5%)

Query: 1   MARSDRLFRLLQALRTLPSPVTAARLAEETDVSLRSLYRDIESLRAAGAVIDGERGFGYR 60
           M R+DRLF+++Q L+      TA  LAE  +VS R++YRD++ L  +G  I+GE G GY 
Sbjct: 1   MRRADRLFQIVQILKH-KRLTTAQELAERLEVSTRTVYRDVQDLCLSGIPIEGEAGVGYL 59

Query: 61  LTEDIALPPQTFTRLEIEALVLGLAEVRHMGEPALAAAAGAVLSKVTATLPDRLQR-QTL 119
           L  ++ +PP  F   E+EA+ +G+  V+  G   L +AA   + KV A LP RLQ  Q+L
Sbjct: 60  LRHEVNVPPLMFNEAELEAIQVGMRMVQTWGGKELGSAARQAMIKVEAVLPKRLQAYQSL 119

Query: 120 HAASQVY----RFERRDPPLANVGLLREACWQERAVVISYVDAEQRRTDRQVLPLAIVYL 175
             +   Y     F+  DP       LR A  +   V + Y DA +  T+R+V PLAI + 
Sbjct: 120 MFSPDFYLDSNEFQFLDP-------LRHASQRREYVKLFYQDANKALTEREVRPLAIYFW 172

Query: 176 ERTLVLLAWCCLRQDFRKFRVDRIADINMTEESFRPRRVQLLRDFVAIL 224
             T  LL WC LR DFR FRVDRI  +      F P   Q L D++ ++
Sbjct: 173 RGTWTLLTWCELRSDFRNFRVDRITGLLTLNRHFEPTPGQELEDYICLM 221