Pairwise Alignments

Query, 293 a.a., ABC transporter membrane spanning protein (sugar) from Agrobacterium fabrum C58

Subject, 296 a.a., maltose ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  103 bits (257), Expect = 5e-27
 Identities = 76/302 (25%), Positives = 143/302 (47%), Gaps = 24/302 (7%)

Query: 6   QRKSLAFLI-GNYVLMLAFAAIFILPLLFMGFSSLKPND----QLLSDATSIRAFLPVGY 60
           Q KSL + +   +  +  F A+ I PLL +   S +  +     L+ D  S+  +     
Sbjct: 5   QGKSLKYRVWATHAALWVFLALIIFPLLMIVAISFREGNFATGSLIPDRPSLEHWKLALG 64

Query: 61  LSLENYTAAFVRAP--IATFIFNSVLVTVVTVFLALLFGSLAAFAFTFLNWRGKDVLFSI 118
           ++++N   +    P  + T+++NSV V  +T  L +   + +A+AF  + ++GK+ +   
Sbjct: 65  IAVQNADGSVTPPPFPVMTWLWNSVKVAGITSVLIVALSTTSAYAFARMRFKGKETILKA 124

Query: 119 ILATLIIPFETIAVPLLLEVNNL----PWIG---SGGFTWGWLNSWHVQIIPWIADGLTI 171
           ++   + P     V L    + L    P++G    GG  + +L    + +  W   G   
Sbjct: 125 MMIFQMFPAVLALVALYALFDKLGQYIPFLGLNTHGGLIFSYLGGIALHV--WTIKG--- 179

Query: 172 FLFVQYFKDLPKELLEAARIDGASWLRIYTQVVMPLSGPVIATAAILKFLVMYSQQYLWP 231
                YF+ + + L EAA +DGA+  + +  V++PLS P++A   IL F+ +  +  +  
Sbjct: 180 -----YFETIDRSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIGVVGEVPVAS 234

Query: 232 LLVTQSEAYRPVMVGLQYFFQLNTPWGEVMAYLTIITLPVLIFYLCLQRLFISSIAASGI 291
           LL++   +Y   +   QY +  N  WG+  A   +  LP+ I +L  QR  +  + A G+
Sbjct: 235 LLLSDVNSYTLAVGMQQYLYPQNYLWGDFAAAAVLSALPITIVFLLAQRWLVGGLTAGGV 294

Query: 292 KG 293
           KG
Sbjct: 295 KG 296