Pairwise Alignments

Query, 293 a.a., ABC transporter membrane spanning protein (sugar) from Agrobacterium fabrum C58

Subject, 287 a.a., sugar uptake ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  112 bits (279), Expect = 1e-29
 Identities = 86/289 (29%), Positives = 150/289 (51%), Gaps = 14/289 (4%)

Query: 7   RKSLAFLIGNYVLMLAFAAIFILPLLFMGFSSLKPNDQLLSDATSIRAFLPVGYLSLENY 66
           RK+L   I  + + +  A  F+ P      +S +PN +  S    +  + P+  LS + Y
Sbjct: 10  RKALRDRIVYHGIGIGTAFFFLAPFAVSFLASFRPNSE--SGRPPLPPW-PISGLSFDAY 66

Query: 67  TAA-FVRAPIATFIFNSVLVTVVTVFLALLFGSLAAFAFTFLNWRGKDVLFSIILATLII 125
            A     A I   +FNS++V++ TV L +    LA + F+   +  K+ LF +I+ATL+I
Sbjct: 67  RALDSFGAGIWQHMFNSLIVSIGTVVLTVAVSVLAGYGFSRYRFPFKNALFVLIIATLMI 126

Query: 126 PFETIAVPLLLEVNNLPWIGSGGFTWGWLNSWHVQIIPWIADGLTIFLFVQYFKDLPKEL 185
           PF++I  PL +    L   G      G +  +    +P+     ++F+    F  +PKE+
Sbjct: 127 PFQSILTPLFII---LARFGLNNSLVGLMLVYVTLQLPF-----SVFMMRNAFDAVPKEI 178

Query: 186 LEAARIDGASWLRIYTQVVMPLSGPVIATAAILKFLVMYSQQYLWPLLVTQSEAYR-PVM 244
            EAARIDGA  L++  +V++PL  P IAT +I  FL  +++ +   +L++ ++ Y  PV+
Sbjct: 179 EEAARIDGARDLKLLVRVLLPLVMPGIATVSIFAFLNAWNEFFAALVLLSSNDNYTLPVL 238

Query: 245 VGLQYFFQLNT-PWGEVMAYLTIITLPVLIFYLCLQRLFISSIAASGIK 292
           +      +L    WG V A + ++ +P L  +L LQR ++  + A  +K
Sbjct: 239 MTAVRAGRLGAINWGAVQAGVAVMVVPCLFVFLLLQRYYMRGLMAGAVK 287