Pairwise Alignments

Query, 293 a.a., ABC transporter membrane spanning protein (sugar) from Agrobacterium fabrum C58

Subject, 282 a.a., sugar ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  149 bits (377), Expect = 5e-41
 Identities = 95/274 (34%), Positives = 146/274 (53%), Gaps = 20/274 (7%)

Query: 20  MLAFAAIFILPLLFMGFSSLKPNDQLLSDATSIRAFLPVGYLSLENYTAAFVRAPIATFI 79
           +LAF  +F  PLL++   + KP  +  S     +A       +L+N+       P   ++
Sbjct: 28  ILAFMTLF--PLLWIVSIAFKPAAESFSSNLIPQA------PTLDNFIYVLTGVPFIRYM 79

Query: 80  FNSVLVTVVTVFLALLFGSLAAFAFTFLNWRGKDVLFSIILATLIIPFETIAVPLLLEVN 139
            NS LV+     +AL F ++A +A   L + G++V+F  I +T ++    I VPL + V 
Sbjct: 80  VNSFLVSATVTVVALFFHTMAGYALARLRFPGREVMFLSIFSTFLVSLPVIIVPLFVIVK 139

Query: 140 NLPWIGSGGFTWGWLNSWHVQIIPWIADGLTIFLFVQYFKDLPKELLEAARIDGASWLRI 199
            +          G LNS+   IIP I +   IFL  QY+  LPKE+ EAARIDGA + RI
Sbjct: 140 AM----------GMLNSYAGLIIPAIFNAFGIFLLRQYYLSLPKEIEEAARIDGAGYWRI 189

Query: 200 YTQVVMPLSGPVIATAAILKFLVMYSQQYLWPLLVTQSEAYRPVMVGLQYF-FQLNTPWG 258
           Y  V++PLS P+++  AIL FL  ++  +LWPL +T       V +G+  F  Q +  W 
Sbjct: 190 YWSVILPLSRPIMSALAILFFLANWN-SFLWPLTITSDPDLWVVQLGIANFKSQYSASWN 248

Query: 259 EVMAYLTIITLPVLIFYLCLQRLFISSIAASGIK 292
            +MA  TI+ +P LI ++  QR  + S+  SG+K
Sbjct: 249 YMMAASTIVAIPTLILFVIFQRQIMDSLKTSGLK 282