Pairwise Alignments

Query, 316 a.a., LysR family transcriptional regulator from Agrobacterium fabrum C58

Subject, 308 a.a., NodD1 nod-box dependent transcriptional activator from Sinorhizobium meliloti 1021

 Score =  133 bits (334), Expect = 6e-36
 Identities = 94/301 (31%), Positives = 145/301 (48%), Gaps = 18/301 (5%)

Query: 9   VDLNLLKVIYALVVKGNMTAAGEYIGLSQPAMSHALKRVRAITGDELFKKTSRGFVMTRF 68
           +DLNLL  + AL+ +  +TAA   I LSQPAMS A+ R+R   GDELF    R  + T  
Sbjct: 6   LDLNLLVALDALMTERKLTAAARRINLSQPAMSAAIARLRTYFGDELFSMQGRELIPTPR 65

Query: 69  CTEIFPAVRRIIEDTETVMLQRLAFDPATSHRAFRIGMNDYFSVVLMPRLVERVRSEAEH 128
              + PAVR  +   +  ++     +PA S R FRI ++D+  +V   R+VERV  EA  
Sbjct: 66  AEALAPAVRDALLHIQLSVIAWDPLNPAQSDRRFRIILSDFMILVFFARIVERVAREAPG 125

Query: 129 CVLEVIHMPRTGISHNRDFMPVVQEHLNEGTIDVAVMTAENFPARYRCASLFTERRVCIM 188
              E++ +         D  P   E L  G +D  +       + +  A LF E  VC+ 
Sbjct: 126 VSFELLPL---------DDDP--HELLRRGDVDFLIFPDVFMSSAHPKAKLFDEALVCVG 174

Query: 189 SANNPAAKEPLTLDALLSLGHVKV----TSSPSRRGWIDERLDAMGLERRVVAVVPHFSA 244
              N      ++ +  +S+GHV         PS   W+   L   G  RR+  VVP F+ 
Sbjct: 175 CPTNKKLLGNISFETYMSMGHVAAQFGREMKPSVEQWL---LLEHGFNRRIELVVPGFTL 231

Query: 245 AVAIVSRSDLVAMMPESVAKLFERSHELLLLESPFEEEKQSTSMIWLAEKERDPASLWLR 304
              ++S ++ +A +P  + K FE++  L ++ SP      + ++ W A    DP ++WLR
Sbjct: 232 IPRLLSGTNRIATLPLRLVKYFEQTIPLRIVTSPLPPLFFTEAIQWPALHNTDPGNIWLR 291

Query: 305 E 305
           E
Sbjct: 292 E 292