Pairwise Alignments

Query, 316 a.a., LysR family transcriptional regulator from Agrobacterium fabrum C58

Subject, 313 a.a., NodD3 nod box-dependent transcriptional activator from Sinorhizobium meliloti 1021

 Score =  126 bits (317), Expect = 6e-34
 Identities = 91/301 (30%), Positives = 148/301 (49%), Gaps = 18/301 (5%)

Query: 9   VDLNLLKVIYALVVKGNMTAAGEYIGLSQPAMSHALKRVRAITGDELFKKTSRGFVMTRF 68
           +DLNLL  + AL+ K ++TAA   I LSQPAMS A+ R+R+   DELF+   R  + T  
Sbjct: 6   LDLNLLVALDALMTKRSVTAAARSINLSQPAMSSAIARLRSYFQDELFRMQGRELITTPR 65

Query: 69  CTEIFPAVRRIIEDTETVMLQRLAFDPATSHRAFRIGMNDYFSVVLMPRLVERVRSEAEH 128
              + PA+R  +   +  ++    F+PA S R FRI ++D+ ++V   ++VERV  EA  
Sbjct: 66  AEALAPAIRDALLHIQFSIISWDMFNPAQSDRCFRIILSDFMTLVFFEKVVERVAREAPG 125

Query: 129 CVLEVIHMPRTGISHNRDFMPVVQEHLNEGTIDVAVMTAENFPARYRCASLFTERRVCIM 188
              E++         N D      E L  G +D  +       + +  A LF +  V + 
Sbjct: 126 VSFELLPP-----DDNPD------ELLRRGEVDFLIFPDVFMSSVHPKAKLFDQTLVSVG 174

Query: 189 SANNPAAKEPLTLDALLSLGHVKV----TSSPSRRGWIDERLDAMGLERRVVAVVPHFSA 244
              N      L+ +  +S+GHV         PS   W+   L   G +RR+  VVP F+ 
Sbjct: 175 CLTNEQLLGDLSFERYMSMGHVAAQFGRALKPSVEQWL---LLEHGYKRRIELVVPGFNL 231

Query: 245 AVAIVSRSDLVAMMPESVAKLFERSHELLLLESPFEEEKQSTSMIWLAEKERDPASLWLR 304
              ++S +  +A++P  +A  F +S  L +++ P      + ++ W A   +D AS+W+R
Sbjct: 232 IPPLLSGTKRIAIIPLRLANHFAKSIPLRIVKHPLPLLSFTEAVQWPALHNKDQASIWMR 291

Query: 305 E 305
           E
Sbjct: 292 E 292