Pairwise Alignments

Query, 316 a.a., LysR family transcriptional regulator from Agrobacterium fabrum C58

Subject, 310 a.a., NodD2 nod box-dependent transcription activator from Sinorhizobium meliloti 1021

 Score =  132 bits (332), Expect = 1e-35
 Identities = 92/301 (30%), Positives = 149/301 (49%), Gaps = 18/301 (5%)

Query: 9   VDLNLLKVIYALVVKGNMTAAGEYIGLSQPAMSHALKRVRAITGDELFKKTSRGFVMTRF 68
           +DLNLL  + AL+ +  +TAA   + LSQPAMS A+ R+R   GDELF    R  + T  
Sbjct: 6   LDLNLLVALDALMTERKLTAAARRVKLSQPAMSAAIARLRTYFGDELFSMQGRELIPTPR 65

Query: 69  CTEIFPAVRRIIEDTETVMLQRLAFDPATSHRAFRIGMNDYFSVVLMPRLVERVRSEAEH 128
              + PAVR  +   +  ++     +PA S R FRI ++D+ ++V   R+VER+  EA  
Sbjct: 66  AEALAPAVRDALLHIQLSVIAWDPINPAQSDRRFRIILSDFMTLVFFERVVERLAREAPG 125

Query: 129 CVLEVIHMPRTGISHNRDFMPVVQEHLNEGTIDVAVMTAENFPARYRCASLFTERRVCIM 188
              E++ +         D  P   E L  G +D  V+      + +  A LF E  VC+ 
Sbjct: 126 VSFELLPL---------DDDP--YELLRRGDVDFLVLPDLFMSSAHPKAKLFAEALVCVG 174

Query: 189 SANNPAAKEPLTLDALLSLGHVKV----TSSPSRRGWIDERLDAMGLERRVVAVVPHFSA 244
              N      L+ +  +S+GHV         PS   W+   L   G +RRV  VVP F+ 
Sbjct: 175 CPTNEQLLGELSFEKYMSMGHVAAQFGRALKPSFEQWL---LLEHGFKRRVELVVPGFTL 231

Query: 245 AVAIVSRSDLVAMMPESVAKLFERSHELLLLESPFEEEKQSTSMIWLAEKERDPASLWLR 304
              ++  ++ +A++P  + K FE++  L +++ P      + ++ W A   +DP ++W+R
Sbjct: 232 IPPLLPHTNRIAIIPLRLVKYFEQTIPLRIVKHPLPPLWFTEAVQWPALHNKDPGNIWMR 291

Query: 305 E 305
           E
Sbjct: 292 E 292