Pairwise Alignments

Query, 316 a.a., LysR family transcriptional regulator from Agrobacterium fabrum C58

Subject, 298 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  132 bits (331), Expect = 1e-35
 Identities = 90/306 (29%), Positives = 152/306 (49%), Gaps = 16/306 (5%)

Query: 5   QLGSVDLNLLKVIYALVVKGNMTAAGEYIGLSQPAMSHALKRVRAITGDELFKKTSRGFV 64
           +L +VDLNL  V  A+  + N+T A E + ++QPA+S+AL R+R    D LF +T +  +
Sbjct: 2   RLQNVDLNLFVVFDAIYTERNLTRAAERLCITQPAVSNALSRLRTSLNDPLFIRTPKAMM 61

Query: 65  MTRFCTEIFPAVRRIIEDTETVMLQRLAFDPATSHRAFRIGMNDYFSVVLMPRLVERVRS 124
            T     +   VR  ++   + M    +FDP  +   F++GM D     ++P L+  ++ 
Sbjct: 62  PTPVAENMIGQVREALKLLSSSMHLGDSFDPLLAEHHFQLGMFDVTEETMLPSLLAALQ- 120

Query: 125 EAEHCVLEVIHMPRTGISHNRDFMPVVQEHLNEGTIDVAV-MTAENFPARYRCASLFTER 183
                    +H PR  IS        + +    G +D+A+       P  Y    L T  
Sbjct: 121 ---------VHAPRLSISSYPVSREEMLKEFVSGRLDLAIDAPIVTHPDLYH-HPLVTVP 170

Query: 184 RVCIMSANNPAAKEPLTLDALLSLGHVKVTSSPSRRGWIDERLDAMGLERRVVAVVPHFS 243
            VC++  ++P   + L+L+  L+L HV V+S     G++D  L+ +G  R +     H  
Sbjct: 171 YVCLVRKDHPEVGDTLSLEQYLALSHVHVSSRRQGVGYVDAALNRLGKHRNIQVRTKHHQ 230

Query: 244 AAVAIVSRSDLVAMMPESVAKLFERSHELLLLESPFEEEKQSTSMIWLAEKERDPASLWL 303
           AA  +V+ ++L   +PES+AK    + +L +L+ PFE E     + W    ++D A+ WL
Sbjct: 231 AAPKLVAETNLATTVPESLAK----NTDLKVLKLPFEVEPIEWHLYWHRSADQDNANRWL 286

Query: 304 REQISA 309
           RE I+A
Sbjct: 287 REFITA 292