Pairwise Alignments

Query, 324 a.a., ABC transporter nucleotide binding/ATPase (oligopeptide) from Agrobacterium fabrum C58

Subject, 330 a.a., Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like (NCBI) from Rhodospirillum rubrum S1H

 Score =  286 bits (733), Expect = 4e-82
 Identities = 153/319 (47%), Positives = 209/319 (65%), Gaps = 4/319 (1%)

Query: 2   SAMLEIKGLKTEVVTDEGNITLIDDITLSLAAGEVMGLVGESGSGKSVTGLSIMGLLDKP 61
           S +LE+  L T   T +G +  ++D++ +L  GE + +VGESGSGK+   LS+MGLL + 
Sbjct: 6   SPILEVTHLDTRFSTPDGEVKAVNDLSFTLNRGETLAVVGESGSGKTQIFLSLMGLLARN 65

Query: 62  VQMTGGKILFKGRDLRSASQKELRSIRGNRIAMIFQDPMSTLNPVLRIDTQMMEVVHAHE 121
            Q++G + LF G+DL   S++EL +IRG+R+AMIFQDPM+ LNP L ++ QM EV+  H+
Sbjct: 66  GQVSG-RALFCGQDLLKLSRRELNAIRGSRMAMIFQDPMTALNPFLTVERQMTEVLIEHK 124

Query: 122 NVSKQVARERARDALGMVGIPSPEERLSAYPHQFSGGMRQRVAIAIALLMSPDVIIADEP 181
            + +  AR  +   L  VGIP    R+  YPH+FSGGMRQRV IAIALL SP+V+IADEP
Sbjct: 125 GLGRAEARAHSIGMLEKVGIPEAARRIGLYPHEFSGGMRQRVMIAIALLCSPEVLIADEP 184

Query: 182 TTALDVTIQAQILSIVQKLAREKGTALIWVTHDLSVVAGLAEKLSVMYAGRIVEQGLTAD 241
           TTALDVT+QAQIL+++  L  E  TA++ +THDL VVAGLA+++ V+Y GRI E G    
Sbjct: 185 TTALDVTVQAQILALLNTLKAEIDTAIVLITHDLGVVAGLADRVLVLYGGRIAETGTVDQ 244

Query: 242 LLRRPLHPYTNGLIASLP-AHNKRGERLRQISGTTPSVANMPKGCAFHPRCSFATEICLN 300
           +     HPYT+GL+ S+P      GE L  I G  P++ N+P GCAF  RCS     C  
Sbjct: 245 VFYDARHPYTHGLLRSMPRLDGVPGETLYAIPGQPPNLQNLPAGCAFQDRCSNRMAQCAE 304

Query: 301 S--PALEPTEGRLLRCFHP 317
           +  P +    GRL  C+ P
Sbjct: 305 APPPPMPIGAGRLCACYFP 323