Pairwise Alignments

Query, 324 a.a., ABC transporter nucleotide binding/ATPase (oligopeptide) from Agrobacterium fabrum C58

Subject, 321 a.a., oligopeptide ABC transporter, ATP-binding protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  271 bits (693), Expect = 2e-77
 Identities = 140/314 (44%), Positives = 197/314 (62%), Gaps = 2/314 (0%)

Query: 4   MLEIKGLKTEVVTDEGNITLIDDITLSLAAGEVMGLVGESGSGKSVTGLSIMGLLDKPVQ 63
           +LE++GL      + G I  + D++ +L  G  + +VGESG GKS+T L+++GL+  P +
Sbjct: 5   LLEVQGLDVVFDIEAGAIHAVRDVSFTLPHGRTLCIVGESGCGKSMTALALLGLVPAPGR 64

Query: 64  MTGGKILFKGRDLRSASQKELRSIRGNRIAMIFQDPMSTLNPVLRIDTQMMEVVHAHENV 123
           +T  ++ F G DL +  +  LR++RG+ +AM+FQDPM++LNPV R+  Q+ E +  H  +
Sbjct: 65  VTARRLQFDGHDLTALDENGLRALRGHHMAMVFQDPMTSLNPVFRVGDQVAEALRLHLRL 124

Query: 124 SKQVARERARDALGMVGIPSPEERLSAYPHQFSGGMRQRVAIAIALLMSPDVIIADEPTT 183
             + ARE   +    VGIPSPE R   YPHQ SGGMRQRV IA+AL   P ++IADEPTT
Sbjct: 125 KGRAAREATIELFRQVGIPSPETRYDDYPHQLSGGMRQRVMIAMALSCGPRLLIADEPTT 184

Query: 184 ALDVTIQAQILSIVQKLAREKGTALIWVTHDLSVVAGLAEKLSVMYAGRIVEQGLTADLL 243
           ALDVTIQ QIL ++  +A     +++ +THDL VVA  A+ + VMYAG IVE     +L 
Sbjct: 185 ALDVTIQGQILGLLSDIAATGRASVLLITHDLGVVAETADDVIVMYAGAIVEHAPVQELF 244

Query: 244 RRPLHPYTNGLIASL-PAHNKRGERLRQISGTTPSVANMPKGCAFHPRCSFATEICLN-S 301
             PLHPYT GL+ S  P H +R  RL  I G  P + ++P GCAF  RC  A E C   +
Sbjct: 245 ASPLHPYTRGLMRSAPPVHGERSPRLEAIRGNVPPLDDLPSGCAFRDRCEHAFERCATAA 304

Query: 302 PALEPTEGRLLRCF 315
           P L     +++RC+
Sbjct: 305 PPLFTLGKQMVRCW 318