Pairwise Alignments

Query, 295 a.a., ABC transporter membrane spanning protein (oligopeptide) from Agrobacterium fabrum C58

Subject, 332 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  173 bits (438), Expect = 5e-48
 Identities = 98/286 (34%), Positives = 162/286 (56%), Gaps = 10/286 (3%)

Query: 6   LRTGLLFMRQFARSPLAVMGLALIFLIVLMAVFAPYLSPQNPYDLMQLDIMDGRMAPGTE 65
           +  G   ++ F  +P A+ G A + L++ +A+ AP L P +P  ++    +     PG  
Sbjct: 52  ITNGRRALKVFLANPNALFGTAFLALVIAVALLAPVLYPGDPLSMVGKPFL----WPGQH 107

Query: 66  SSTGFTFLFGSDDQGRDMLSAILYGLRISLIVGLGSAALAFIIGTAFGLTAAYVGGRVET 125
            +    F  G+D  GRD+L+ IL+G RISL VGL + AL    G   G  A Y  G ++ 
Sbjct: 108 PA----FPLGTDSLGRDVLAGILHGSRISLFVGLMATALGLTFGVVVGAIAGYFSGWIDD 163

Query: 126 AMMRLVDLQLSFPTILSALLILALLGKSVGNVVFAIVLVEWATYARTARGAALTELRREY 185
            ++RL+++  + P+ +  ++++A++  S   V  AI ++ W T AR  R        +++
Sbjct: 164 LLVRLIEIFQTLPSFVLLVVLVAIVQPSATTVTLAIAVISWPTVARLTRAEFRAIREKDF 223

Query: 186 VEAARSLRLPHRNILFRQLLPNCLSPLVVLLTMQVARAITLEATLSFLGLGVPVTEPSLG 245
           V AARSL   H  I+ R++LPN L P++V  ++ VA AI +E+ LSF+GLG P    S G
Sbjct: 224 VMAARSLGFGHGRIIVREILPNALPPIIVTSSVMVATAILMESALSFMGLGDP-NVVSWG 282

Query: 246 LLISSGYEFILSGTYWIALFPGIALLVTIFAINLVGDRLRQLVDPK 291
            +I +G E + +  Y  AL PG+A++ T+ A+NL+GD L   ++P+
Sbjct: 283 SMIGTGRELVRTAWYLTAL-PGLAIVFTVLALNLIGDGLNDALNPR 327