Pairwise Alignments

Query, 519 a.a., ABC transporter substrate binding protein (oligopeptide) from Agrobacterium fabrum C58

Subject, 521 a.a., extracellular solute-binding protein, family 5 from Pseudomonas syringae pv. syringae B728a

 Score =  444 bits (1141), Expect = e-129
 Identities = 229/514 (44%), Positives = 317/514 (61%), Gaps = 4/514 (0%)

Query: 8   LLTSLIGLVAQPVMAKNLTIGLSGTVTSIDPHFYNASPNNAIAMQIFDRLTERTAEGRLV 67
           LL S + L A  V A++L IG +  V+S+DP   N + + ++A+  F+ L  R  + + +
Sbjct: 8   LLASALLLAAGGVTAQDLRIGYADPVSSLDPQLNNYAGDRSVALHAFESLVSRR-DDKTL 66

Query: 68  EGLATKWDTVSETKWRFALRDGVKWHDGKPFTSDDVIFTLDRAGSVPNSPGGFGGFMRNI 127
            GLA  W  V +T W FALRD VKW DG P T+DD++F+ +RA +VP S   + G MR +
Sbjct: 67  PGLAKSWKVVDDTTWEFALRDDVKWQDGTPLTADDLVFSFERARNVPGSVASYAGAMRTV 126

Query: 128 ASVEADGDNAVIISTKAPAPTLPGDLANIAIVSRHAGEGADTADYNSGKAAIGTGAFRLT 187
            S++A  D+ +II T++P   L  D+ +I IVSRHAG  A +ADYNSGKA IGTG +R  
Sbjct: 127 ESIKARDDHTLIIKTRSPNANLLPDIDSIYIVSRHAGAAASSADYNSGKAMIGTGPYRFV 186

Query: 188 TFKQGIEVGLERNPDWWGKKVAWDHATYRMISSASARTTAALAGDVDVIDAPAATDIARF 247
           +F  G      RN ++WG K  WD   +R I++A+ RT A LAGDVDVID  + TD+AR 
Sbjct: 187 SFVPGDRTIFARNDNYWGGKPTWDKVDFRFIANAANRTAALLAGDVDVIDKVSPTDVARL 246

Query: 248 KTTANLSFVSTPGLRVIYLAPSTSGDAWKAFVKGPKGEALDNNPLADPRVRNALSEAINR 307
           + T N++  +  GLR + + PS        F++   G+ L  NPL D RVR ALS AINR
Sbjct: 247 RKTPNVNVFAYQGLRALIIQPSFRAGP-NEFIRDNAGKPLAENPLLDVRVRKALSLAINR 305

Query: 308 EGIVDKIMEGTATASGQWLPKGAFSYTPDIQPPKPDAAGAKKLLADAGYPDGFQLTVHVP 367
             I ++IM+GT T + QW+P   F Y P I+    D   AK LLA AG+P+GFQLTVHVP
Sbjct: 306 PAINERIMQGTVTEANQWMPANTFGYNPQIKNIPYDLKQAKDLLAQAGFPEGFQLTVHVP 365

Query: 368 NDRYPNAPAVVQAVAQMWTRIGVKTNVEALPWTTFSSR--KSEFAMKLLGLGNATYDASS 425
            DRYP AP V+QAVAQ WTRIGVK  +E LPW  ++ +  K+E A+ ++  GN T +A+ 
Sbjct: 366 GDRYPQAPEVMQAVAQFWTRIGVKVQLEVLPWAVYAGKANKNELAISVIAWGNGTGEAAY 425

Query: 426 MLVNVLGTVDPKRGLGAANDSGYSNPALDDLVSKAMMIYDDKAREAALIEAVKVAITDGA 485
            L N+L TVD  +G GA+N   YSNP +D  ++ +   +D+  R   L ++V++   D  
Sbjct: 426 ALTNILTTVDSSKGQGASNWGHYSNPLVDKALADSTAEFDEARRRKILQDSVQIVSDDVG 485

Query: 486 IIPLYQQSNAWVLRKGLNYAPRIDERTLAKDVSE 519
           IIPL+   N W  RKGL   P + +RT A  V+E
Sbjct: 486 IIPLFHYQNIWAARKGLKVEPLVSDRTAATMVTE 519