Pairwise Alignments

Query, 519 a.a., ABC transporter substrate binding protein (oligopeptide) from Agrobacterium fabrum C58

Subject, 508 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

 Score =  127 bits (318), Expect = 1e-33
 Identities = 122/473 (25%), Positives = 199/473 (42%), Gaps = 56/473 (11%)

Query: 53  IFDRLTERTAEGRLVEGLATKWDTVSE-TKWRFALRDGVKWHDGKPFTSDDVIFTLDRAG 111
           +++ L +R+   + V  LA  W++ ++ T+W F LR GVK+HDG  F + DV+++  R  
Sbjct: 63  VYEPLVDRSNTMQPVPALAESWESNADATEWTFHLRKGVKFHDGSDFDAKDVVYSYRRLL 122

Query: 112 SVPNSPGGFGGFMRNIASVEADG-----DNAVIISTKAPAPTLPGDLANIAIVSRHA--- 163
               SPGGF      +A ++ADG     D+ V    K P   LP     + I +++A   
Sbjct: 123 DPAVSPGGFS----TLAFLDADGITAIDDHTVRFKVKEPVVELP-----MLIATKYALMV 173

Query: 164 GEGADTADYNSGKAAIGTGAFRLTTFK-QGIEVGLERNPDWWGKKVAWDHATYRMIS-SA 221
            EGA + D        GTG F   TF   G    + RNP +W   +          S   
Sbjct: 174 PEGAKSEDLR--VKGNGTGPFMQETFTINGAVRVMRRNPTYWRAGLPKSECLEITTSLEP 231

Query: 222 SARTTAALAGDVDVIDAPAATDIARFKTTANLSFVSTPGLRVIYLAPSTSGDAWKAFVKG 281
           ++R +A L+G VD+        +   K    +   +TPG   +Y+A  T           
Sbjct: 232 TSRLSALLSGTVDLSLTVDPASLITLKDNPAVELAATPGATSLYIAVWT----------- 280

Query: 282 PKGEALDNNPLADPRVRNALSEAINREGIVDKIMEGTATASGQWLPKGAFSYTPDIQPPK 341
                 D  P    +VR A+   ++R+ I+D ++ G            +  +        
Sbjct: 281 ------DTPPFDSVKVREAMKLVMDRQKILDTVLLGYGEVGADTPIPPSSPFGLGTPAKT 334

Query: 342 PDAAGAKKLLADAGYPDGFQLTVHVPNDRYPNAPAVVQAVAQMWTRIGVKTNVEALP--- 398
            D   A  LLA+AG+PDG    ++  +D YP    + Q  AQM    G++ NV   P   
Sbjct: 335 ADIEKATALLAEAGHPDGIDFDLYT-SDSYPGMMLLAQVYAQMAAPAGIRVNVITSPAEG 393

Query: 399 -WTTFSSRKSEFAMKLLGLGNATYDASSMLVNVLGTVDPKRGLGAANDSGYSNPALDDLV 457
            W T   +K      ++   +A   A ++ +++             N++ ++    D LV
Sbjct: 394 YWDTIWLKKP----AVISYTSARPPAEALTLSL-------NSKSEWNETHWTRDDFDALV 442

Query: 458 SKAMMIYDDKAREAALIEAVKVAITDGAIIPLYQQSNAWVLRKGLN-YAPRID 509
            KA    D+K R     +A ++   +G +I     S    LRKG + Y P +D
Sbjct: 443 VKAGQTADEKQRNDLYRDAQRIVADEGGMILPVFSSVVAGLRKGCSGYEPNVD 495