Pairwise Alignments

Query, 519 a.a., ABC transporter substrate binding protein (oligopeptide) from Agrobacterium fabrum C58

Subject, 531 a.a., oligopeptidemurein peptide ABC transporter substrate-binding protein precursor from Sinorhizobium meliloti 1021

 Score =  271 bits (694), Expect = 3e-77
 Identities = 164/467 (35%), Positives = 245/467 (52%), Gaps = 4/467 (0%)

Query: 25  LTIGLSGTVTSIDPHFYNASPNNAIAMQIFDRLTERTAEGRLVEGLATKWDTVSETKWRF 84
           L I  S  + ++DP + N + N ++   I++RL  +     L  GLAT W  +S+T+W F
Sbjct: 35  LRIATSYKLMTLDPQYANLNENTSLLSHIYERLVYQDDNLELKPGLATSWRPLSDTQWAF 94

Query: 85  ALRDGVKWHDGKPFTSDDVIFTLDRAGSVPNSP-GGFGGFMRNIASVEADGDNAVIISTK 143
            LRD V++HDG  F +DDV++T++R       P GGF  ++  I SV A     V+I T 
Sbjct: 95  KLRDKVRFHDGSAFDADDVVYTIERIRDFLKPPSGGFRSYVSGIKSVSAPDPLTVLIETD 154

Query: 144 APAPTLPGDLANIAIVSRHAGEGADTADYNSGKAAIGTGAFRLTTFKQGIEVGLERNPDW 203
              P LP   +++ +++R +     T + N+G    GTG +R  ++  G  + L RN D+
Sbjct: 155 GAVPNLPLFFSSLFVMNRPSKGFETTENLNAGHPPNGTGPYRFESWSSGESLRLARNDDY 214

Query: 204 WGKKVAWDHATYRMISSASARTTAALAGDVDVIDAPAATDIARFKTTANLSFVSTPGLRV 263
           WG K AW   T+R+I + +AR  A   G+VDV  A  A D+A  K        S    RV
Sbjct: 215 WGGKPAWSKVTFRVIENPAARVAALSTGEVDVAHAIPARDVASLKQRG-AKIASVGAARV 273

Query: 264 IYLAPSTSGDAWKAFVKGPKGEALDNNPLADPRVRNALSEAINREGIVDKIMEGTATASG 323
            ++    + D     V    GE + N P  +P VR AL+ A +R  +VDKI+ G  TA+ 
Sbjct: 274 NFVQFDVARDTLPG-VTDKSGEPIAN-PFKNPLVRRALTLATDRGILVDKILAGYGTAAA 331

Query: 324 QWLPKGAFSYTPDIQPPKPDAAGAKKLLADAGYPDGFQLTVHVPNDRYPNAPAVVQAVAQ 383
           Q  P G    + ++ P  P+   AK LLA AG+PDGF L +  P  RYP     +QAVAQ
Sbjct: 332 QVFPNGLPGTSANLLPEAPNYDEAKMLLAKAGFPDGFNLVLAGPAGRYPGDAESLQAVAQ 391

Query: 384 MWTRIGVKTNVEALPWTTFSSRKSEFAMKLLGLGNATYDASSMLVNVLGTVDPKRGLGAA 443
            W RIGV     A P++ F+++++     +   G +      +L ++L + DP+RG GA 
Sbjct: 392 SWARIGVNAQPAAAPFSVFNTKRAAGDYGVWYGGTSGEAVDIILHSLLASPDPERGTGAL 451

Query: 444 NDSGYSNPALDDLVSKAMMIYDDKAREAALIEAVKVAITDGAIIPLY 490
           N   Y N A D +++ A  I     R AAL +A ++ + D  IIPLY
Sbjct: 452 NFGKYRNEAFDAMLAGAESIAVGPERNAALAQATELVMADQPIIPLY 498