Pairwise Alignments

Query, 376 a.a., ABC transporter nucleotide binding/ATPase (spermidine/putrescine) from Agrobacterium fabrum C58

Subject, 377 a.a., spermidine/putrescine ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  233 bits (594), Expect = 7e-66
 Identities = 143/360 (39%), Positives = 207/360 (57%), Gaps = 10/360 (2%)

Query: 26  KPVLQLVDVRKIFGDFAAVDGISVDIKEGEFVTIVGPSGSGKTTLLRMLAGMESPSEGYI 85
           KPV++L  + K F     +  +++D+  GEF+TI+GPSG GKTT+LRM+AG E+  +G I
Sbjct: 15  KPVIRLSGISKSFDGKEIIGNLNLDVNHGEFLTILGPSGCGKTTVLRMIAGFETADQGQI 74

Query: 86  TLRGEVINSVPADKRPTCLVFQSLALFPHKTVGENIEFPLKVRKMPAAERRIRALEFMRM 145
            L  + +  VPA++R    VFQS ALFPH TV EN+ F L+++K+P +E   R +E +RM
Sbjct: 75  LLDDQDVTQVPAEQRHVNTVFQSYALFPHMTVFENVAFGLRMQKVPQSEIEPRVMEALRM 134

Query: 146 VRLPESYYSKNVMRCSGGEKQRVALARAFAYDPDVLFFDEPLSALDYKLKKVLEKELKDL 205
           VRL E    K   + SGG++QR+A+ARA    P VL  DE LSALDYKL+K ++ ELK L
Sbjct: 135 VRLAEMAQRK-PHQLSGGQQQRIAIARAVVNKPKVLLLDESLSALDYKLRKQMQSELKQL 193

Query: 206 HRESGKTFVYITHSLEEAMVMSDRVGVMSRGHLVQIGTPEEIYTKPATRFVAEFFGEVNS 265
            R+ G TF+++TH  EEA+ MSDR+ VM  G + Q G+P EIY  P   FVA F GE+N 
Sbjct: 194 QRQLGITFIFVTHDQEEALSMSDRIIVMRSGKIEQDGSPREIYEDPKNLFVARFIGEINV 253

Query: 266 FE---VKRKGEGAWTL-ADG-KPITVAPVAEAIGETATVIVRPETMRFITGASSADNLIS 320
           F+   + R  E    +  +G + I         G+   V++RPE +R      S +  I 
Sbjct: 254 FQATTIDRIDEKRIRVDIEGIESIVYYEDEVKAGDKLQVLLRPEDLRIEEIKESEEKGIV 313

Query: 321 GTIYNEYSLGSRMQ--YQVHSGDRIYLVEAARSAVSGV--SSGDLVTIGWDASDAIVVGD 376
           G + +    G  ++   ++ SG  + + E        V  S G  V + W  S  +V+ D
Sbjct: 314 GHVTDRTYKGMTLESVVELESGMCVMVSEFFNEDDPDVDHSIGQKVAVTWVESWEVVLND 373