Pairwise Alignments

Query, 268 a.a., ABC transporter membrane spanning protein (spermidine/putrescine) from Agrobacterium fabrum C58

Subject, 256 a.a., spermidine/putrescine ABC transporter permease PotC from Vibrio cholerae E7946 ATCC 55056

 Score =  116 bits (290), Expect = 5e-31
 Identities = 69/243 (28%), Positives = 127/243 (52%), Gaps = 2/243 (0%)

Query: 15  AWTAFVVLAVYLPILCGALAGLSKGRYFGFPIRVFSTEWWGKTLASLEIQTLVQNSILIA 74
           ++ + V L +YLPI+   +A       FG     F+T+W+   + +  +     +SI +A
Sbjct: 8   SFMSLVYLFLYLPIIV-LIANSFNENKFGIKWGGFTTKWYHALMNNDSLMQAAWHSINVA 66

Query: 75  FIVTLVSVILAFFGALAFARYEWKGRKLFQKAILLPVFFPQPVLGLALLLWFNALGINPS 134
                 + ++    A+A  RY++KG+K+    + + +  P  V+ ++LL  F  +G    
Sbjct: 67  VFSATAATLIGSLTAVALFRYQFKGKKVVSGMLFVVMMSPDIVMAISLLALFLVMGAKLG 126

Query: 135 WQTAVVAHLVWIVPVVTLVIAIQVYSFDPTLEEAARDLGASRWFILREITLPILWPGIWS 194
           + T ++AH+ + +P V + +  ++  FD  + EAA+DLGA  W IL++I LP+  P + +
Sbjct: 127 FFTLLIAHITFCLPFVVVTVYTRLNGFDVKMLEAAKDLGAGEWVILKKIILPLAKPAVAA 186

Query: 195 GALFAFLLSWGNFPLSLYTAG-VDSTIPKWLYSKMVAGYSPMVPALGTMSTLSAAALLLA 253
           G L +F LS  +  +S +  G     +P  +YS +  G SP V AL T+  + +  L++A
Sbjct: 187 GWLLSFTLSLDDVIISSFVTGPTYEILPLKIYSMVKVGISPEVNALATVMLVVSLVLVVA 246

Query: 254 GGL 256
             L
Sbjct: 247 SQL 249