Pairwise Alignments

Query, 345 a.a., glycine betaine transporter periplasmic subunit from Agrobacterium fabrum C58

Subject, 321 a.a., putative glycine betaine transport system substrate binding protein from Phaeobacter inhibens DSM 17395

 Score = 76.6 bits (187), Expect = 8e-19
 Identities = 71/333 (21%), Positives = 130/333 (39%), Gaps = 30/333 (9%)

Query: 12  ASTIVAASLPVLSSASAAELPGDGKTIRFAQSDSLGANYVVAKIVTKGFEALGYKVKLST 71
           A+T+   ++P L+          G+ ++       GA  +   +       +G KV+   
Sbjct: 11  AATVSIFAMPALA----------GEEVKIGVPSWTGAQAIAHLLGAVVEMRIGGKVEFVP 60

Query: 72  VNTTLFFQAVAQG--DLDIATDINFPQREPGFRKVADKADMIGKGLIEGGGINGYLIDKK 129
            N    FQA+ QG  D+D+  D+  P ++   +K  D+A  +        G  G+ + + 
Sbjct: 61  GNNATIFQAMDQGKGDIDVHPDVWLPNQQSFTQKYVDEAGTVTLSSNPYEGNQGFCVSQD 120

Query: 130 TADAYNIKTLDQMKDPKIAALFGTD--GKADLINCDPGWSCGDVVEYQLDKFGLKDTVKS 187
             +A N+  +  +  P +AAL  +D  GK +L    PGW+  +V E +   +GL D +  
Sbjct: 121 FGEANNVTDIADLGRPDVAALMDSDGNGKGELWIGAPGWASANVNEVKTRDYGLLDFIDP 180

Query: 188 VRGKYEALMVEAVARAKRGEPVFFYAWSPS--WMNKALQPGKDVVWLPTPFDALPPSVPS 245
           VR +             +GE   FY + P   W    ++   +  + P  +  + PS   
Sbjct: 181 VRAEESVKTARIKDSIAKGEGYAFYCYKPHAVWYMFDVRMLSEPTFDPEKYTMVQPSDDP 240

Query: 246 SGTNAVANVEGCAGAANPCRMAMAAWNWTAVGNKEFLKENPEVKSFVENMSFPLSTWSSW 305
              +     +      +  +    AW+ +  G       +P +  F  N +      S +
Sbjct: 241 DWYD-----KSSVATKDALKNVQIAWSNSLEG------RSPAIAEFFANFALTADDVSGF 289

Query: 306 EQAISQKGGSDATVRGLSDAWLSENKALLDGWI 338
              IS KG   A V   +  W+  N   +D W+
Sbjct: 290 AYEISGKGREPADV---AREWVEANPDRVDAWL 319