Pairwise Alignments

Query, 345 a.a., glycine betaine transporter periplasmic subunit from Agrobacterium fabrum C58

Subject, 323 a.a., glycine betaine-binding protein from Phaeobacter inhibens DSM 17395

 Score = 55.8 bits (133), Expect = 1e-12
 Identities = 67/282 (23%), Positives = 111/282 (39%), Gaps = 35/282 (12%)

Query: 25  SASAAELPGDGKTIRFAQSDSLGANYVVAKIVTKGFEALGYKVKLSTVNTTLFFQAVAQ- 83
           +ASAA+    G+ +   Q D   A  V A       E  G  V    +++     +V++ 
Sbjct: 17  TASAAQADDCGE-VSIMQGDWGSAQIVTAVAKFLMEEGYGCDVTAMPLSSNPALASVSET 75

Query: 84  GDLDIATDINFPQREPGFRKVADKADMIG-KGLIEGGGINGYLIDKKTADAYNIKTLDQM 142
           G+ DI T+I +    P ++ + D   +I    ++  GG+ G+ +     + +        
Sbjct: 76  GEPDILTEI-WTNGAPAYQGLVDSGAIIPVTEVLSDGGVEGFFVPNYLVEEH-------- 126

Query: 143 KDPKIAALFGTDGKADLI-----NCDPGWSCGDVVEYQLDKFGLKDT--VKSVRGKYEAL 195
             P++A + G     +L+     NC  GW+C +V    +   GL D      V G  E L
Sbjct: 127 --PELATIEGIAANPELVGNRFHNCPEGWTCLNVSTNLMKAGGLIDAGIENFVHGSGETL 184

Query: 196 MVEAVARAKRGEPVFFYAWSPSWMNKALQPGKDVVWLPTPFDALPPSVPSSGTNAVANVE 255
                A  +  EP F + W+P+ +      GK   +  T  D  P        N  A  +
Sbjct: 185 AASIAAAYENKEPWFGFYWAPTSVL-----GK---YPMTLVDMGPHDPEKHACNITAECD 236

Query: 256 GCAGAANPCRMAMAAWNWTAVGNKEFLKENPEVKSFVENMSF 297
                  P   A        V +KEF+ EN E+   + N+SF
Sbjct: 237 ------TPAMSAFPRSEVVTVLSKEFMAENAEISELMTNLSF 272