Pairwise Alignments

Query, 307 a.a., ABC transporter membrane spanning protein (glycine betaine/L-proline) from Agrobacterium fabrum C58

Subject, 283 a.a., Histidine ABC transporter, permease protein (TC 3.A.1) from Pseudomonas fluorescens FW300-N2E2

 Score =  214 bits (545), Expect = 2e-60
 Identities = 122/280 (43%), Positives = 177/280 (63%), Gaps = 9/280 (3%)

Query: 10  FPIDAWIADGVQWIALNLRPLFVAIK----WPIENLLAFNDHILHAIPFPIFLVLSFLIA 65
           F I  W+   V  +  N   +F  I     W I NL    + +L   P+ + L +   IA
Sbjct: 8   FSIADWVNGWVDALVTNYGDVFRHISDTLLWAIVNL----EGLLRMAPWWLMLAIVGGIA 63

Query: 66  YRLASLGIAIFTAISFV-VIASLGVWDESMTTLSLISTAIVISTVIGIPVGIWCAINNSV 124
           +      +A    +  + ++ ++G+WD+ M TL+L+  A +IS +IGIP+GI  A +N +
Sbjct: 64  WHATRKVVATAVIVGLLFLVGAVGLWDKLMQTLALMLVATLISVLIGIPLGILSARSNRL 123

Query: 125 WQVVRPVLDIMQTTPTFVYLVPVVMLFGVGTVPGEVAVVIAAAPPLIRFTNLGIRMVETE 184
             V+ P+LDIMQT P+FVYL+PV+MLFG+G VP   A VI AAPPLIR T+LGIR V+ E
Sbjct: 124 RSVLMPLLDIMQTMPSFVYLIPVLMLFGLGKVPAIFATVIYAAPPLIRLTDLGIRQVDGE 183

Query: 185 MVEAGLAFGADRRQLLWEIQFPLAIPTILGGLNQTVLTAMVMSVVVAMIGAEGLGLVVLQ 244
           ++EA  AFGA+R Q L+ +Q PLA+P+I+ G+NQT + A+ M V+ +MIGA GLG  VL 
Sbjct: 184 VMEAINAFGANRWQQLFGVQLPLALPSIMAGINQTTMMALSMVVIASMIGARGLGEDVLV 243

Query: 245 GLGRLDVGRAAVGGIAIILLAMILDRITQKLAMPATSKAK 284
           G+  L+VGR    G+AI++LA+++DRITQ    P    +K
Sbjct: 244 GIQTLNVGRGLEAGLAIVILAVVIDRITQAYGRPRHEVSK 283