Pairwise Alignments

Query, 307 a.a., ABC transporter membrane spanning protein (glycine betaine/L-proline) from Agrobacterium fabrum C58

Subject, 277 a.a., ABC transporter permease subunit from Methanococcus maripaludis S2

 Score =  191 bits (486), Expect = 1e-53
 Identities = 99/264 (37%), Positives = 162/264 (61%)

Query: 12  IDAWIADGVQWIALNLRPLFVAIKWPIENLLAFNDHILHAIPFPIFLVLSFLIAYRLASL 71
           I  ++ + + ++  N    F  I + I++ + F   +L +I   + ++L  +I ++  +L
Sbjct: 9   IGKFLVNLIDFLIDNYSGFFDLISYVIQSGVDFFHFLLFSINPYLMILLIAVIVWKTVNL 68

Query: 72  GIAIFTAISFVVIASLGVWDESMTTLSLISTAIVISTVIGIPVGIWCAINNSVWQVVRPV 131
              +++    V+I  +G+WD SM TLSLI T+ +I+ ++GIP+GI  A +  V  ++ P+
Sbjct: 69  KSMLYSVFFLVIIVMMGLWDTSMITLSLIITSTLIALLLGIPLGIVKARSKLVSTLLDPM 128

Query: 132 LDIMQTTPTFVYLVPVVMLFGVGTVPGEVAVVIAAAPPLIRFTNLGIRMVETEMVEAGLA 191
           LD+MQT P+  YL+P V+ FG+G VPG +A VI A PP I+ T LGI  V  E++E G A
Sbjct: 129 LDVMQTLPSLAYLIPAVLFFGIGEVPGVIATVIFAMPPAIKLTALGIEQVSNELIEVGRA 188

Query: 192 FGADRRQLLWEIQFPLAIPTILGGLNQTVLTAMVMSVVVAMIGAEGLGLVVLQGLGRLDV 251
           FG    Q+L +I+ P A+P+I+ G+NQ ++ +  M V+   IG+ GLG V++ G+ R  +
Sbjct: 189 FGGTSWQILTKIELPTAVPSIMMGVNQAIMLSFSMVVIAGFIGSGGLGEVIISGIQRYSL 248

Query: 252 GRAAVGGIAIILLAMILDRITQKL 275
             A   GIA+  LA+I DRIT+ L
Sbjct: 249 APALEAGIAVTFLAVIFDRITRNL 272