Pairwise Alignments

Query, 363 a.a., ABC transporter nucleotide binding/ATPase (glycine betaine/L-proline) from Agrobacterium fabrum C58

Subject, 377 a.a., spermidine/putrescine ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  178 bits (452), Expect = 2e-49
 Identities = 97/236 (41%), Positives = 148/236 (62%), Gaps = 9/236 (3%)

Query: 6   LNDVSLSVPAGAMYMIMGLSGSGKSTLARCINRLNEPTAGKILLDGRDIVPLKPAELRDI 65
           + +++L V  G    I+G SG GK+T+ R I        G+ILLD +D+  + PAE    
Sbjct: 33  IGNLNLDVNHGEFLTILGPSGCGKTTVLRMIAGFETADQGQILLDDQDVTQV-PAE---- 87

Query: 66  RRRRVSMVFQHFALLPNKTVIENAEFGLKMRGVPLQQRRERAEEILSIVGLAKWAKHYPH 125
            +R V+ VFQ +AL P+ TV EN  FGL+M+ VP  +   R  E L +V LA+ A+  PH
Sbjct: 88  -QRHVNTVFQSYALFPHMTVFENVAFGLRMQKVPQSEIEPRVMEALRMVRLAEMAQRKPH 146

Query: 126 ELSGGMRQRVGLARALATDADLLIMDEAFSALDPLIRSEMQDELLRLQRTLNKTIVFITH 185
           +LSGG +QR+ +ARA+     +L++DE+ SALD  +R +MQ EL +LQR L  T +F+TH
Sbjct: 147 QLSGGQQQRIAIARAVVNKPKVLLLDESLSALDYKLRKQMQSELKQLQRQLGITFIFVTH 206

Query: 186 DFQEALKLGTRIAIMKDGAVVREGTPQAIVADPRNDYVSAFTRDIDRSRVFEARAV 241
           D +EAL +  RI +M+ G + ++G+P+ I  DP+N +V+ F  +I+   VF+A  +
Sbjct: 207 DQEEALSMSDRIIVMRSGKIEQDGSPREIYEDPKNLFVARFIGEIN---VFQATTI 259