Pairwise Alignments

Query, 363 a.a., ABC transporter nucleotide binding/ATPase (glycine betaine/L-proline) from Agrobacterium fabrum C58

Subject, 389 a.a., betaine/proline/choline family ABC transporter ATP-binding protein from Methanococcus maripaludis S2

 Score =  272 bits (696), Expect = 1e-77
 Identities = 148/354 (41%), Positives = 233/354 (65%), Gaps = 17/354 (4%)

Query: 3   VVGLNDVSLSVPAGAMYMIMGLSGSGKSTLARCINRLNEPTAGKILLD-GRDIVPLKPAE 61
           VVGL +++  V  G +++IMGLSGSGKSTL RCINRL +PT GKI+L+ G DI  +   E
Sbjct: 42  VVGLRNINFDVKRGEIFVIMGLSGSGKSTLIRCINRLIKPTFGKIVLETGADISQMSEKE 101

Query: 62  LRDIRRRRVSMVFQHFALLPNKTVIENAEFGLKMRGVPLQQRRERAEEILSIVGLAKWAK 121
           L +IRR+   MVFQ F LLPN++V+EN   GL+++G+ L++R E++E+ LS+VGL  W K
Sbjct: 102 LLEIRRKYFGMVFQKFGLLPNRSVLENVALGLEIQGMGLEERIEKSEKALSLVGLKGWEK 161

Query: 122 HYPHELSGGMRQRVGLARALATDADLLIMDEAFSALDPLIRSEMQDELLRLQRTLNKTIV 181
               ELSGGM+QRVGLAR LA + ++L+MDE FSALDPLIR EMQ+ LL++Q+ + KTI+
Sbjct: 162 SKISELSGGMQQRVGLARGLAVNPEILLMDEPFSALDPLIRLEMQELLLKIQKKMKKTII 221

Query: 182 FITHDFQEALKLGTRIAIM-KDGAVVREGTPQAIVADPRNDYVSAFTRDIDRSRVFEARA 240
           FITHD  EA+KLG RI I+ ++G++V+   P+ I+ +P+ND+V +F +D+D++ V  A +
Sbjct: 222 FITHDLNEAIKLGDRIMILNEEGSLVQLSHPEEILLNPQNDFVESFVKDVDKTTVIRAES 281

Query: 241 VMQHCE-----ALGRSGEIQIVGQTAGKTKRAGFALDPSGRVVGLLDQAALLQLDSGSSC 295
           +++  E      + +   ++I+G+         + LD SG+ +G+++   L   +    C
Sbjct: 282 LVKKPEFTLNNTIEKENAVKILGEL---NLDFAYVLDDSGKYIGVVNNEELQNSEKIMDC 338

Query: 296 ESLMSRDFVKIRENTKLIDAA--RMNRPQQPMAVVDEDDRFVGLLESDQILACI 347
                   +K  E+ K I+    +      P+ +VD+++ F+G +E ++++  I
Sbjct: 339 IHK-----IKPLEDVKTINQGLPQFISSDYPVPIVDDENNFLGYVEFEEVIKLI 387