Pairwise Alignments

Query, 232 a.a., type IV secretion protein AvhB5 from Agrobacterium fabrum C58

Subject, 233 a.a., VirB5 type IV secretion protein from Sinorhizobium meliloti 1021

 Score =  363 bits (932), Expect = e-105
 Identities = 186/233 (79%), Positives = 214/233 (91%), Gaps = 1/233 (0%)

Query: 1   MTSYRLHGVLLSAVLMLAAEGVSGQGIPVNDQAAIAKQIESIAQLKSQLDALNEQIGQAR 60
           M  +R++ V++++ L+L+A G +GQGIPV DQ AIAKQIESIAQLK+QLDALN+QI QA+
Sbjct: 1   MAFFRINCVVIASALILSATGAAGQGIPVIDQTAIAKQIESIAQLKAQLDALNQQIEQAQ 60

Query: 61  QLYGSLNKLTDMADVAEVLNDPAIRKALPFDFAAIEGLLKGNGTGVFGDSASRFLEGNST 120
           QL+GSLNKLTDM+DVA VLNDPAIRKALP DF+AIEGL KGNGTGVF DSAS+FL+GN+T
Sbjct: 61  QLHGSLNKLTDMSDVASVLNDPAIRKALPADFSAIEGLFKGNGTGVFADSASKFLDGNTT 120

Query: 121 YRTDA-DDFYARELSRLQNKNAGQMSVGEQIYDAGTKRIDGIDQLRGKISTAGDAKEIAD 179
           Y+T+A DDFYA+ELSR+QNKNAGQMS+G+QIYDA TKRIDGIDQLR KISTAGDAK+IAD
Sbjct: 121 YQTNAADDFYAQELSRIQNKNAGQMSLGQQIYDAATKRIDGIDQLREKISTAGDAKDIAD 180

Query: 180 LQARLQVEQAFLQTDVLRMEGLRMVQEAQNQVDEQRKAEDWRQRMDNMKAALQ 232
           LQARLQ EQAFLQTDVLRMEGLRMVQ+AQ QVDEQRKAEDWRQRMD +KAALQ
Sbjct: 181 LQARLQAEQAFLQTDVLRMEGLRMVQQAQEQVDEQRKAEDWRQRMDAIKAALQ 233