Pairwise Alignments

Query, 360 a.a., ABC transporter substrate binding protein (mannopine) from Agrobacterium fabrum C58

Subject, 343 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score = 57.0 bits (136), Expect = 7e-13
 Identities = 75/311 (24%), Positives = 123/311 (39%), Gaps = 25/311 (8%)

Query: 33  ASAEQRVVIATTGGTYEKALREAWFEPFTKATGIKVVTVSGTDAEKRAKVTAMVQTGNVT 92
           A+AE + ++    G Y   +     E FTK TGIKV+    +  E    + A ++T N  
Sbjct: 22  AAAEDKELVFMNWGPY---INSGILEQFTKETGIKVIY---STYESNETLYAKLKTHNQG 75

Query: 93  WDL-----YLDGEIQAGSDAHFAITEDLSDFCMQFINSTDLLADSCTRGGAKLQSTSTLL 147
           +DL     Y   +++            LS+F     N  D   D        +     + 
Sbjct: 76  YDLVVPSTYFVAKMRDEGMLQKIDKSKLSNFKNLDSNYLDKPYD--PNNDYSIPHVVAIT 133

Query: 148 AYKLNENGSNP---QTWADMWDLAKFPGARSFPNFDDPWRVLAAALLADGVPREKLFPLD 204
              +N +  +P   Q+W D+W   +  G       DD   V   AL   G          
Sbjct: 134 GLAVNTDMYDPNDFQSWGDLWK-PELKGQLML--MDDTREVFHIALRKLGYSGNSTDDKQ 190

Query: 205 VDRAFRKLDELRDSVQVWWRTGDQSVQAFRNDEYRVGQIWLTRAKALKAEG--YKIGWSY 262
           +D A+ +L +L  +V V+    D     + + E  +G +W   A A + EG   K+ +  
Sbjct: 191 IDEAYAELQKLMPNVLVF--NSDNPAAPYLSGEVGLGMLWNGSAAAAQKEGLPIKLVFPK 248

Query: 263 DGAFLVGDRIALVRGAPNRENALKLIEFWLRNPAAQAKACETLSCTPPSQKAISQMSSEA 322
           +G     D  A+  GA N + A K+I+F LR   A+  + +T   T    KA +    + 
Sbjct: 249 EGGIGWVDNFAISSGAKNVDAAHKMIDFLLRPEIAEQISRDTGYLT--GVKASNDKFQDV 306

Query: 323 RATLPSAADVE 333
               PS  D++
Sbjct: 307 APLFPSQEDLD 317