Pairwise Alignments

Query, 360 a.a., ABC transporter substrate binding protein (mannopine) from Agrobacterium fabrum C58

Subject, 345 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score = 57.4 bits (137), Expect = 6e-13
 Identities = 69/266 (25%), Positives = 109/266 (40%), Gaps = 28/266 (10%)

Query: 58  EPFTKATGIKVVTVSGTDAEKRAKVTAMVQTGNVTWDLYL-----------DGEIQAGSD 106
           E FTK TGIKV+    +  E    + A ++T    +DL +           +G +Q    
Sbjct: 42  EDFTKETGIKVIY---STYESNESMYAKLKTQGAGYDLVVPSTYFVSKMRKEGMLQEIDH 98

Query: 107 AHFAITEDLS-DFCMQFINSTDLLADSCTRGGAKLQSTSTLLAYKLNENGSNPQTWADMW 165
           +  +  +DL  ++  +  +  +  +     G   +   + +L  K  +N      W D+W
Sbjct: 99  SKLSHFKDLDPNYLNKPFDPGNKFSIPYIWGATGIGINTDMLDKKSLKN------WGDLW 152

Query: 166 DLAKFPGARSFPNFDDPWRVLAAALLADGVPREKLFPLDVDRAFRKLDELRDSVQVWWRT 225
           D AK+ G       DD   V   AL   G       P ++  A+R+L +L  +V V+   
Sbjct: 153 D-AKWAGQLML--MDDAREVFHIALSKLGYSPNTTNPKEIKAAYRELKKLMPNVLVF--N 207

Query: 226 GDQSVQAFRNDEYRVGQIWLTRAKALKAEG--YKIGWSYDGAFLVGDRIALVRGAPNREN 283
            D     +   E  +G +W   A   + EG   +I W   G     D I++  GA N E 
Sbjct: 208 SDFPANPYLAGEVSLGMLWNGSAYMARQEGAPIQIIWPEKGTIFWMDSISIPAGAKNIEA 267

Query: 284 ALKLIEFWLRNPAAQAKACETLSCTP 309
           A K+I+F LR   A   A E    TP
Sbjct: 268 AHKMIDFLLRPENAAKIALEIGYPTP 293