Pairwise Alignments

Query, 360 a.a., ABC transporter substrate binding protein (mannopine) from Agrobacterium fabrum C58

Subject, 371 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

 Score = 52.0 bits (123), Expect = 3e-11
 Identities = 77/296 (26%), Positives = 124/296 (41%), Gaps = 29/296 (9%)

Query: 4   SDQTPKACLKSAFYVFVAFALMFALGLEKASAEQ-----RVVIATTGGTYEKALREAWFE 58
           S Q  +  L ++     A A +  LG+ +A A++      +++   GG++  AL+    +
Sbjct: 8   SAQIGRRTLLASMAAAGASAGLSTLGVSRAFAQEPEKPAEIIVRAWGGSWVDALKAGVSD 67

Query: 59  PFTKATGIKVVTVSGTDAEKRAKVTAMVQTGNV-TWDLYLDGEIQAGSDAHFAITEDLSD 117
            FTK TGI V      D E + KV A V    V    +  D    A   A   +TEDLSD
Sbjct: 68  SFTKMTGIAVRHDLTEDNEIQPKVWAAVAQKRVPPIHINWDTTTNATKSALRGVTEDLSD 127

Query: 118 FCMQFINSTDLLADSCTRGGAKLQST---STLLAYKLN--ENGSNPQTWADMWDLAKFPG 172
                 N+TD LA      G  + +T     +LAY+ +   NG+ P++W D+ D  K  G
Sbjct: 128 L-PNLKNATD-LAKPVGLDGYPIVNTYGYVYVLAYRPSAFPNGA-PKSWKDLLD-PKLKG 183

Query: 173 ARSFPN----FDDPWRVLAAALLADGVPREKLFPLDVDRAFRKLDELRDSVQVWWRTGDQ 228
             +  N    F  P +V     L D        P ++  A+  + ++++   +     D 
Sbjct: 184 RIALYNDGIGFHFPAQVAGGGKLED-------IPANMQPAWDFISKIKEQQPLLGEDPDF 236

Query: 229 SVQAFRNDEYRVGQIWLTRAKALKAEGYKIGW--SYDGAFLVGDRIALVRGAPNRE 282
           +   F+  E        T A+  K  G +I W    +GA    D + + +G P  E
Sbjct: 237 TTW-FQKGEIDAACTISTNAREAKKNGIEIAWVVPEEGAKFDTDGLWIPKGLPENE 291