Pairwise Alignments

Query, 350 a.a., ATP-dependent DNA ligase from Agrobacterium fabrum C58

Subject, 346 a.a., ATP-dependent DNA ligase from Sinorhizobium meliloti 1021

 Score =  390 bits (1001), Expect = e-113
 Identities = 200/343 (58%), Positives = 250/343 (72%), Gaps = 9/343 (2%)

Query: 6   RSKPLLRDTEAPIRSKPRRKRNPAQPQLLFNPMPDRVEPALEQLKAHPPQGDQWSWELKW 65
           R+KPLL+D ++  +SKP R R+PAQP L F+PM +R+EP L  LK  PP+G  W +E+KW
Sbjct: 4   RAKPLLQD-DSVAKSKPARPRDPAQPNLPFDPMAERIEPCLALLKPVPPKGPDWVFEVKW 62

Query: 66  DGYRLAVHIEPTGVRILTRGGHDWTHRFPAIAEAARALGPATMIIDGEAVVLDDEGRPDF 125
           DGYRLA+HIEP GVRI+TRGGHDWTHRFPAIAEA   LG  T I+DGEAVVLD+EGR DF
Sbjct: 63  DGYRLAIHIEPKGVRIITRGGHDWTHRFPAIAEATSKLGVGTAILDGEAVVLDEEGRSDF 122

Query: 126 GLLQKSLGASGKAAGNRAS-DAILYAFDLMYLDGHDLREMEYRSRRHLLEDTIKANDGAI 184
           G LQ+SLG  G   G R+S +++ +AFDL+Y DGHDL   E   RRHLLE  +    GAI
Sbjct: 123 GALQRSLGGRG---GKRSSTESVFFAFDLLYFDGHDLSGTELSVRRHLLEGFLDGPTGAI 179

Query: 185 RLSETLDADPNVLLEHIRSLGLEGIVGKHLDQPYRSGRAGDWVKVKCIESEAFMVVGYEP 244
           + SE +  D   LLE   S+GL+GI+ KH D PYRSGR GDW+K+KC++SE+FM+VGYE 
Sbjct: 180 QSSEEVFGD-GALLEKACSMGLKGIIAKHRDWPYRSGRTGDWLKIKCLQSESFMIVGYEQ 238

Query: 245 SMASPAGFASLVVAAYRGDELIHVGNVGTGFKEAEMIGLRKMLDKLRWKRKPPPVPFTEK 304
           S+ +  G  SL++A  +G + I+VG+VGTGF   +   LRK LD+L  K   P VP   K
Sbjct: 239 SLTARGGLGSLLLAGRKGHDWIYVGSVGTGFNTKDAEYLRKTLDRL--KTSKPAVPLKGK 296

Query: 305 TDIVWVEPTLIAEIEFRAWTADGKLRHASYKGLRERQDNADVY 347
            ++V+ +PTLIAEIEFR WT DG LRHASYKGLRE QDNA V+
Sbjct: 297 -NLVFAQPTLIAEIEFRGWTHDGSLRHASYKGLREVQDNAAVF 338