Pairwise Alignments

Query, 350 a.a., ATP-dependent DNA ligase from Agrobacterium fabrum C58

Subject, 556 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score =  172 bits (437), Expect = 1e-47
 Identities = 100/261 (38%), Positives = 139/261 (53%), Gaps = 13/261 (4%)

Query: 38  MPDRVEPALEQLKAHPPQGDQWSWELKWDGYRLAVHIEPTGVRILTRGGHDWTHRFPAIA 97
           +PD +EP L +  A PP  D W  E+K+DGYR+ + I    V + TR G DWT ++P IA
Sbjct: 243 LPDFIEPQLCETLARPPASDDWLHEIKFDGYRIQMRIADGKVTLKTRKGLDWTAKYPEIA 302

Query: 98  EAARALGPATMIIDGEAVVLDDEGRPDFGLLQKSLGASGKAAGNRASDAILYAFDLMYLD 157
           +AA  L     IIDGE   LDD G PDF  LQ +L      +  +  + + +AFDL++  
Sbjct: 303 DAASEL--PDCIIDGEICALDDNGAPDFAALQAAL------SEGKTGNLVYFAFDLLFDG 354

Query: 158 GHDLREMEYRSRRHLLEDTIKA--NDGAIRLSETLDADPNVLLEHIRSLGLEGIVGKHLD 215
           G DLR M    R+  LED + A  +D  IR  +  ++  + +L     L LEGIV K +D
Sbjct: 355 GEDLRSMRLVERKKRLEDFLAAGSDDPRIRYVDHFESGGDAVLRSACKLSLEGIVSKQMD 414

Query: 216 QPYRSGRAGDWVKVKCIESEAFMVVGYEPSMASPAGFASLVVAAYRGDELIHVGNVGTGF 275
            PY+SGR   W K KC      ++ GY  +      F SL+V  +RGD  ++VG VGTGF
Sbjct: 415 APYQSGRTDTWAKSKCRAGHEVVIGGYATTNGK---FRSLLVGVHRGDHFVYVGRVGTGF 471

Query: 276 KEAEMIGLRKMLDKLRWKRKP 296
             A++      L  L   + P
Sbjct: 472 GAAKVERFFPKLKALEASKSP 492