Pairwise Alignments

Query, 350 a.a., ATP-dependent DNA ligase from Agrobacterium fabrum C58

Subject, 636 a.a., ATP-dependent DNA ligase from Sinorhizobium meliloti 1021

 Score =  187 bits (475), Expect = 7e-52
 Identities = 112/303 (36%), Positives = 155/303 (51%), Gaps = 9/303 (2%)

Query: 39  PDRVEPALEQLKAHPPQGDQWSWELKWDGYRLAVHIEPTGVRILTRGGHDWTHRFPAIAE 98
           P  +EP    LK  PP G  W  E+K DGYR  +HI    + + TR G DWT  F AIA 
Sbjct: 56  PAFIEPCHPTLKKRPPDGADWVHEIKLDGYRAQLHINGGKITLYTRTGLDWTTEFEAIAT 115

Query: 99  AARALGPATMIIDGEAVVLDDEGRPDFGLLQKSLGASGKAAGNRASDAILYAFDLMYLDG 158
           AA  L    +++DGE  V    G PDF  L++ L      A   + +    AFDL++LDG
Sbjct: 116 AAEDLAGHDVVMDGEVTVFGKTGLPDFQALRREL------AKRSSPNLTFQAFDLLHLDG 169

Query: 159 HDLREMEYRSRRHLLEDTIKANDGAIRLSETLDADP-NVLLEHIRSLGLEGIVGKHLDQP 217
           +DLR +    R+ +L + I    G I   + L+ +    +  H   +GLEGIV K  D P
Sbjct: 170 YDLRRVPLIERKRVLRELIGDAAGTIAYVDYLELEEGEPVYRHACKMGLEGIVSKRKDAP 229

Query: 218 YRSGRAGDWVKVKCIESEAFMVVGY-EPSMASPAGFASLVVAAYRGDELIHVGNVGTGFK 276
           YRSGR   W K KC + +AF +V + E   A P   ASL +  + GD L++ G   TG+ 
Sbjct: 230 YRSGRQEIWTKTKCTKRDAFPIVAFVEKLGAQPRRIASLYLGRWEGDRLVYAGKAQTGYT 289

Query: 277 EAEMIGLRKMLDKLRWKRKPPPVPFTEKTDIVWVEPTLIAEIEFRAWTADGKLRHASYKG 336
                 +R+ L+ L   + P   P   K    WVEP + AEI++   T DG LR   +KG
Sbjct: 290 LTAAREVRERLNPLIIGKSPLSHPI-NKPKATWVEPQVYAEIDYGGVTDDGLLREPVFKG 348

Query: 337 LRE 339
           L++
Sbjct: 349 LQD 351