Pairwise Alignments

Query, 350 a.a., ATP-dependent DNA ligase from Agrobacterium fabrum C58

Subject, 355 a.a., ATP-dependent DNA ligase from Sinorhizobium meliloti 1021

 Score = 82.4 bits (202), Expect = 2e-20
 Identities = 97/347 (27%), Positives = 146/347 (42%), Gaps = 38/347 (10%)

Query: 21  KPRRKRNPAQPQLLFN--PMPDRVEPALEQLKAHPPQGDQWSWELKWDGYRLAVHIEPTG 78
           KP +K  P+         P+P    P   +     P GD W +E KWDG+R         
Sbjct: 8   KPTKKAAPSSAAKKAGGFPLPVSTAPMEARSATELPGGDAWQYEPKWDGFRCLAFKSGDE 67

Query: 79  VRILTRGGHDWTHRFPAIAEAARALGPATMIIDGEAVVLDDEGRPDFGLLQKSL--GASG 136
           V I  + G      FP I    R L P   ++DGE +V++ +GR  F  LQ  L   AS 
Sbjct: 68  VDIRAKSGKPLGRFFPEIVALLRRLEPDMFVLDGE-LVIEVDGRLSFDALQMRLHPAASR 126

Query: 137 KAAGNRASDAILYAFDLMY-LDGHDLREMEYRSRRHLLEDTIKANDGAIRLSETLDADPN 195
               ++ + A L  FD++   DG  L     ++RR  LE   K N     ++E L++ P 
Sbjct: 127 VQKLSQETPAKLILFDMLAGTDGTILTGEPLQTRRACLEAFAKKN----AVAEMLESSPF 182

Query: 196 VL--------LEHIRSLGLEGIVGKHLDQPYRSGRAGDWVKVKCIESEAFMVVGYEPSMA 247
            L        L    +   +G+V K  D  Y  G     VKVK +++   +V G+     
Sbjct: 183 TLDIKEAERWLTSWEAGATDGVVAKRRDGVYECGERA-MVKVKRLKTADCVVGGFRYESD 241

Query: 248 SPAGFASLVVAAYRGDELI-HVGNVGTGFKEAEMIGLRKMLDKLRWKRKPP--------- 297
           S     SL++  Y  + L+ HVG   T   + E   L   L+ L   R+PP         
Sbjct: 242 SSL-VGSLLLGLYDTEGLLNHVGFTAT-ISDKERPALTNQLEAL---REPPGFTGKAPGG 296

Query: 298 PVPFTEKTDIVW--VEPTLIAEIEFRAWTADGKLRHASYKGLRERQD 342
           P  ++ +    W  V P L+ E+ F    ++ + RH + K +R R D
Sbjct: 297 PSRWSSERSGEWEPVRPELVVEVRF-DHVSNRRFRHGT-KLMRWRPD 341