Pairwise Alignments

Query, 317 a.a., LysR family transcriptional regulator from Agrobacterium fabrum C58

Subject, 308 a.a., NodD1 nod-box dependent transcriptional activator from Sinorhizobium meliloti 1021

 Score =  133 bits (334), Expect = 6e-36
 Identities = 96/293 (32%), Positives = 138/293 (47%), Gaps = 8/293 (2%)

Query: 10  RSFDLNLLVAFDAMMEEMSVTRAARRLKIQQPAMSHNISTLRTLFQDELFIRVGQIMKPT 69
           R  DLNLLVA DA+M E  +T AARR+ + QPAMS  I+ LRT F DELF   G+ + PT
Sbjct: 4   RGLDLNLLVALDALMTERKLTAAARRINLSQPAMSAAIARLRTYFGDELFSMQGRELIPT 63

Query: 70  ARALNLSGPVRQALRQAQAAVLMADAFEPATEQRTFRLGLSSEVELLLLPDLTARLRDIA 129
            RA  L+  VR AL   Q +V+  D   PA   R FR+ LS  + L+    +  R+   A
Sbjct: 64  PRAEALAPAVRDALLHIQLSVIAWDPLNPAQSDRRFRIILSDFMILVFFARIVERVAREA 123

Query: 130 PGI--RILARGGDATEVNAMLDAGVIDMSVGCSYLPDSRHHSEPLYQSSVLCCFNPQLLK 187
           PG+   +L    D  E   +L  G +D  +       S H    L+  +++C   P   K
Sbjct: 124 PGVSFELLPLDDDPHE---LLRRGDVDFLIFPDVFMSSAHPKAKLFDEALVCVGCPTNKK 180

Query: 188 VSNPVSLDAYMAAQHAVISQTDSLHGCVKD--ALEHAGAELEVVAAAPDFMSVLATARSS 245
           +   +S + YM+  H        +   V+    LEH G    +    P F  +      +
Sbjct: 181 LLGNISFETYMSMGHVAAQFGREMKPSVEQWLLLEH-GFNRRIELVVPGFTLIPRLLSGT 239

Query: 246 AVIATVSSRIARRYGPLLGLEVSPVPLALSFPPVAMVWPLHMDSDLGCAWLRE 298
             IAT+  R+ + +   + L +   PL   F   A+ WP   ++D G  WLRE
Sbjct: 240 NRIATLPLRLVKYFEQTIPLRIVTSPLPPLFFTEAIQWPALHNTDPGNIWLRE 292