Pairwise Alignments

Query, 317 a.a., LysR family transcriptional regulator from Agrobacterium fabrum C58

Subject, 310 a.a., NodD2 nod box-dependent transcription activator from Sinorhizobium meliloti 1021

 Score =  129 bits (325), Expect = 7e-35
 Identities = 101/305 (33%), Positives = 145/305 (47%), Gaps = 9/305 (2%)

Query: 10  RSFDLNLLVAFDAMMEEMSVTRAARRLKIQQPAMSHNISTLRTLFQDELFIRVGQIMKPT 69
           R  DLNLLVA DA+M E  +T AARR+K+ QPAMS  I+ LRT F DELF   G+ + PT
Sbjct: 4   RGLDLNLLVALDALMTERKLTAAARRVKLSQPAMSAAIARLRTYFGDELFSMQGRELIPT 63

Query: 70  ARALNLSGPVRQALRQAQAAVLMADAFEPATEQRTFRLGLSSEVELLLLPDLTARLRDIA 129
            RA  L+  VR AL   Q +V+  D   PA   R FR+ LS  + L+    +  RL   A
Sbjct: 64  PRAEALAPAVRDALLHIQLSVIAWDPINPAQSDRRFRIILSDFMTLVFFERVVERLAREA 123

Query: 130 PGI--RILARGGDATEVNAMLDAGVIDMSVGCSYLPDSRHHSEPLYQSSVLCCFNPQLLK 187
           PG+   +L    D  E   +L  G +D  V       S H    L+  +++C   P   +
Sbjct: 124 PGVSFELLPLDDDPYE---LLRRGDVDFLVLPDLFMSSAHPKAKLFAEALVCVGCPTNEQ 180

Query: 188 VSNPVSLDAYMAAQHAVISQTDSLHGCVKD--ALEHAGAELEVVAAAPDFMSVLATARSS 245
           +   +S + YM+  H       +L    +    LEH G +  V    P F  +      +
Sbjct: 181 LLGELSFEKYMSMGHVAAQFGRALKPSFEQWLLLEH-GFKRRVELVVPGFTLIPPLLPHT 239

Query: 246 AVIATVSSRIARRYGPLLGLEVSPVPLALSFPPVAMVWPLHMDSDLGCAWLRE-QIREAM 304
             IA +  R+ + +   + L +   PL   +   A+ WP   + D G  W+RE  ++EA 
Sbjct: 240 NRIAIIPLRLVKYFEQTIPLRIVKHPLPPLWFTEAVQWPALHNKDPGNIWMREILLQEAS 299

Query: 305 LSENQ 309
            SE Q
Sbjct: 300 RSEFQ 304