Pairwise Alignments

Query, 317 a.a., LysR family transcriptional regulator from Agrobacterium fabrum C58

Subject, 298 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  130 bits (328), Expect = 3e-35
 Identities = 92/298 (30%), Positives = 141/298 (47%), Gaps = 8/298 (2%)

Query: 9   LRSFDLNLLVAFDAMMEEMSVTRAARRLKIQQPAMSHNISTLRTLFQDELFIRVGQIMKP 68
           L++ DLNL V FDA+  E ++TRAA RL I QPA+S+ +S LRT   D LFIR  + M P
Sbjct: 3   LQNVDLNLFVVFDAIYTERNLTRAAERLCITQPAVSNALSRLRTSLNDPLFIRTPKAMMP 62

Query: 69  TARALNLSGPVRQALRQAQAAVLMADAFEPATEQRTFRLGLSSEVELLLLPDLTARLRDI 128
           T  A N+ G VR+AL+   +++ + D+F+P   +  F+LG+    E  +LP L A L+  
Sbjct: 63  TPVAENMIGQVREALKLLSSSMHLGDSFDPLLAEHHFQLGMFDVTEETMLPSLLAALQVH 122

Query: 129 APGIRILARGGDATEVNAMLDAGVIDMSVGCSYL--PDSRHHSEPLYQSSVLCCFNPQLL 186
           AP + I +      E+     +G +D+++    +  PD  HH  PL     +C       
Sbjct: 123 APRLSISSYPVSREEMLKEFVSGRLDLAIDAPIVTHPDLYHH--PLVTVPYVCLVRKDHP 180

Query: 187 KVSNPVSLDAYMAAQHAVISQTDSLHGCVKDALEHAGAELEVVAAAPDFMSVLATARSSA 246
           +V + +SL+ Y+A  H  +S      G V  AL   G    +        +       + 
Sbjct: 181 EVGDTLSLEQYLALSHVHVSSRRQGVGYVDAALNRLGKHRNIQVRTKHHQAAPKLVAETN 240

Query: 247 VIATVSSRIARRYGPLLGLEVSPVPLALSFPPVAMVWPLHMDSDLGCAWLREQIREAM 304
           +  TV   +A+       L+V  +P  +      + W    D D    WLRE I   M
Sbjct: 241 LATTVPESLAKN----TDLKVLKLPFEVEPIEWHLYWHRSADQDNANRWLREFITALM 294