Pairwise Alignments

Query, 371 a.a., ABC transporter nucleotide binding/ATPase (sugar) from Agrobacterium fabrum C58

Subject, 354 a.a., sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC from Rhodopseudomonas palustris CGA009

 Score =  321 bits (823), Expect = 2e-92
 Identities = 171/316 (54%), Positives = 215/316 (68%), Gaps = 8/316 (2%)

Query: 1   MSGVELKGVSKSFGAVDVIHDIDLSITAGEFVVFVGPSGCGKSTLLRLIAGLEETSRGEI 60
           M+ V++  V KSFG  +V+H + + I  GEFVV VGPSGCGKSTLLR++AGLE+ + G I
Sbjct: 1   MASVQIHDVRKSFGGFEVLHGVTVPIEDGEFVVLVGPSGCGKSTLLRMLAGLEKITAGTI 60

Query: 61  LIGGRDVTDADPSDRGIAMVFQSYALYPHMTVAQNMGFGLRMAHRPKEEVTAMVRHAAEI 120
            IG R V D  P +R IAMVFQ+YALYPHMTVAQNMGF L++    ++ + + V+ AA+I
Sbjct: 61  SIGERVVNDVQPKERDIAMVFQNYALYPHMTVAQNMGFSLKLRGADQKAIDSKVQRAADI 120

Query: 121 LHLTPLLDRRPGQLSGGQRQRVAIGRAIVRNPEVFLFDEPLSNLDAELRVGMRIEIARLH 180
           L L  LLDR P QLSGGQRQRVA+GRAIVR+P+VFLFDEPLSNLDA+LRV MR EI  LH
Sbjct: 121 LDLGKLLDRYPRQLSGGQRQRVAMGRAIVRDPQVFLFDEPLSNLDAKLRVAMRTEIKELH 180

Query: 181 KQLGNTMIYVTHDQTEAMTLADKIVVLRAGRIEQIGSPFELYSDPDNLFVAGFIGSPKMN 240
           ++L  T +YVTHDQ EAMT+ADKIVV++ G +EQIG+P +LY  PDN FVAGFIGSP MN
Sbjct: 181 QRLKTTTVYVTHDQIEAMTMADKIVVMQDGIVEQIGAPLDLYDRPDNKFVAGFIGSPAMN 240

Query: 241 FVPA-----GHEAGALVVAGHRLTFAAPAGLPTNCQLQLGIRPENLTLTRDGERGLAVTV 295
           F+       G +      +G +L  AA         +  GIRPE+L      + G+   V
Sbjct: 241 FLDGTLKVNGGQPYVETASGAKLPIAAAPANGNGRAVSYGIRPEHLDF---ADSGIPAEV 297

Query: 296 GFTEFLGGTTYLYGHI 311
              E  G  T +   +
Sbjct: 298 AVVEPTGSETQIVARV 313