Pairwise Alignments

Query, 292 a.a., ABC transporter membrane spanning protein (sugar) from Agrobacterium fabrum C58

Subject, 291 a.a., sugar uptake ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  143 bits (360), Expect = 5e-39
 Identities = 97/287 (33%), Positives = 150/287 (52%), Gaps = 9/287 (3%)

Query: 7   SATTQPKKRRGRRIGLYVILFHITCILVGLLFLAPIVLVLLASFRPPAMASSGLFSVQGL 66
           S  T    RR +  GLY     +  +LV +LF  P    +++S +    A      +  L
Sbjct: 12  SNATYRTLRRVKTAGLYA---GVAAVLVYMLF--PYYWAIVSSTKT-GQALYQFTLLPAL 65

Query: 67  GFGNYGRLEDFGAGILHYAGNSLFVALATAAFTILVSVFAGYGFSRFRFPFKLVAFVLIL 126
            F NY +L D     +    NS  VAL + A ++++ + A Y   R  FP   +  + +L
Sbjct: 66  DFSNYRQLFD-NPVFMGALVNSGVVALVSTAVSLVIGILAAYALGRLHFPPGRIVLIAVL 124

Query: 127 STIMVPFQSILTPLFLILPKLGLQNTLSGLVFIYVTLQLPFSIFMMRNAFDAVPKEIEEA 186
              + P   +L+ +F ++  LGL N  S L+  Y+ L LPF+ +++ +    +P E+EEA
Sbjct: 125 MISVFPQVVVLSGMFEVIGWLGLYNRPSALIVSYLILTLPFTTWILTSFIRDLPNELEEA 184

Query: 187 ARIDGVKGLRALVYVLGPLVFPGIVSVGLFAFLNAWNEFLGALV-LLTDQDRYTLPVLVT 245
           A IDG   LR L +VL PL+ P I S GL +F+ AWNEFL AL  +LTD++R T+PV + 
Sbjct: 185 ALIDGCSRLRILTHVLLPLMGPAIASTGLLSFILAWNEFLFALTFILTDENR-TVPVAIG 243

Query: 246 AVRSGRYGSIDWGAVQAGVTVMMIPCLILFVTLQRFYIRGLTAGAVK 292
            +         +G + A    + +P L+L +  QR  + GLT+GAVK
Sbjct: 244 LLTGSSRYEYPFGQIMAASVTVTLPLLVLVLIFQRKIVAGLTSGAVK 290